RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MAGEB6Q8N7X4 407 aa30.81■■■□□ 2.52
TMEM55B-202ENST00000398020 BTDP43251 543 aa30.8■■■□□ 2.52
TMEM55B-202ENST00000398020 FAM163AQ96GL9 167 aaPredicted RBP30.8■■■□□ 2.52
TMEM55B-202ENST00000398020 CDC42EP5Q6NZY7 148 aa30.79■■■□□ 2.52
TMEM55B-202ENST00000398020 LDHCP07864 332 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 SLC9C2Q5TAH2 1124 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 CYP7A1P22680 504 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 PRAMEF18Q5VWM3 479 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 ERICH6BQ5W0A0 696 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 APOBEC3FQ8IUX4 373 aaKnown RBP30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 USP40Q9NVE5 1235 aa30.78■■■□□ 2.52
TMEM55B-202ENST00000398020 PASKQ96RG2 1323 aa30.77■■■□□ 2.52
TMEM55B-202ENST00000398020 TCP10L2B9ZVM9 353 aa30.77■■■□□ 2.52
TMEM55B-202ENST00000398020 GPR75-ASB3A0A0A6YYF3 556 aa30.76■■■□□ 2.51
TMEM55B-202ENST00000398020 CHGBP05060 677 aa30.76■■■□□ 2.51
TMEM55B-202ENST00000398020 PDE6AP16499 860 aa30.76■■■□□ 2.51
TMEM55B-202ENST00000398020 SLFNL1Q499Z3 407 aa30.76■■■□□ 2.51
TMEM55B-202ENST00000398020 PPP4R2Q9NY27 417 aa30.76■■■□□ 2.51
TMEM55B-202ENST00000398020 AATFQ9NY61 560 aaKnown RBP eCLIP30.75■■■□□ 2.51
TMEM55B-202ENST00000398020 DEFB129Q9H1M3 183 aa30.74■■■□□ 2.51
TMEM55B-202ENST00000398020 ZNF408Q9H9D4 720 aa30.74■■■□□ 2.51
TMEM55B-202ENST00000398020 TMOD2Q9NZR1 351 aa30.74■■■□□ 2.51
TMEM55B-202ENST00000398020 SKAP1Q86WV1 359 aa30.74■■■□□ 2.51
TMEM55B-202ENST00000398020 MIGA1Q8NAN2 632 aa30.74■■■□□ 2.51
TMEM55B-202ENST00000398020 ZNF532Q9HCE3 1301 aa30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 IGSF3O75054 1194 aa30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 KBTBD3Q8NAB2 608 aa30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 CDCA5Q96FF9 252 aa30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 NOL10Q9BSC4 688 aaKnown RBP30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 OSBPL3Q9H4L5 887 aa30.73■■■□□ 2.51
TMEM55B-202ENST00000398020 NFIAQ12857 509 aa30.72■■■□□ 2.51
TMEM55B-202ENST00000398020 RHBDL3P58872 404 aa30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 RASA3Q14644 834 aa30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 MYH7P12883 1935 aa30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 TCRBV5S4A2TA0A5A2 114 aa30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 ADD2P35612 726 aa30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 DYNLL1P63167 89 aaKnown RBP30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 SH3RF3Q8TEJ3 882 aaPredicted RBP30.71■■■□□ 2.51
TMEM55B-202ENST00000398020 BAG3O95817 575 aa30.7■■■□□ 2.5
TMEM55B-202ENST00000398020 TNFAIP1Q13829 316 aa30.7■■■□□ 2.5
TMEM55B-202ENST00000398020 TMEM39BQ9GZU3 492 aa30.7■■■□□ 2.5
TMEM55B-202ENST00000398020 CNTNAP1P78357 1384 aa30.7■■■□□ 2.5
TMEM55B-202ENST00000398020 CELF2O95319 508 aaKnown RBP30.69■■■□□ 2.5
TMEM55B-202ENST00000398020 TCP10Q12799 353 aa30.69■■■□□ 2.5
TMEM55B-202ENST00000398020 FSD1Q9BTV5 496 aa30.69■■■□□ 2.5
TMEM55B-202ENST00000398020 TRIM6-TRIM34B2RNG4 842 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 CST9Q5W186 159 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 CDAN1Q8IWY9 1227 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 TRPM7Q96QT4 1865 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 WDHD1O75717 1129 aaPredicted RBP30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 TNNI2P48788 182 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 APLP1P51693 650 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 PICALMQ13492 652 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 FAM198AQ9UFP1 575 aa30.68■■■□□ 2.5
TMEM55B-202ENST00000398020 PPP4CP60510 307 aa30.67■■■□□ 2.5
TMEM55B-202ENST00000398020 ZSCAN25Q6NSZ9 544 aa30.67■■■□□ 2.5
TMEM55B-202ENST00000398020 TEX11Q8IYF3 940 aa30.67■■■□□ 2.5
TMEM55B-202ENST00000398020 DDX4Q9NQI0 724 aaKnown RBP30.67■■■□□ 2.5
TMEM55B-202ENST00000398020 RGS3P49796 1198 aa30.66■■■□□ 2.5
TMEM55B-202ENST00000398020 FKBP1CQ5VVH2 108 aa30.66■■■□□ 2.5
TMEM55B-202ENST00000398020 TMED8Q6PL24 325 aaPredicted RBP30.66■■■□□ 2.5
TMEM55B-202ENST00000398020 RILPL2Q969X0 211 aa30.66■■■□□ 2.5
TMEM55B-202ENST00000398020 EVI5LQ96CN4 794 aa30.66■■■□□ 2.5
TMEM55B-202ENST00000398020 RFX7Q2KHR2 1363 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 HTRA3P83110 453 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 ZFPM1Q8IX07 1006 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 IDI2Q9BXS1 227 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 PPP2R3BQ9Y5P8 575 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 MAGEB6P1A0A0J9YX57 407 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 HSPA6P17066 643 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 UBE3CQ15386 1083 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 NBPF12Q5TAG4 269 aaPredicted RBP30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 FAM83AQ86UY5 434 aa30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 RIOK1Q9BRS2 568 aaKnown RBP30.65■■■□□ 2.5
TMEM55B-202ENST00000398020 RNF113AO15541 343 aaKnown RBP30.64■■■□□ 2.5
TMEM55B-202ENST00000398020 TEPSINQ96N21 525 aa30.64■■■□□ 2.5
TMEM55B-202ENST00000398020 TMEM88BA6NKF7 163 aa30.63■■■□□ 2.49
TMEM55B-202ENST00000398020 PLCG2P16885 1265 aa30.63■■■□□ 2.49
TMEM55B-202ENST00000398020 TTC22Q5TAA0 569 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 FAM151AQ8WW52 585 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 PUS7LQ9H0K6 701 aaKnown RBP30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 FZD1Q9UP38 647 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 CDK5RAP2Q96SN8 1893 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 GSPT1P15170 499 aaKnown RBP30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 PRKG1Q13976 671 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 LCORLQ8N3X6 602 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 TGFBRAP1Q8WUH2 860 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 ARMT1Q9H993 441 aa30.62■■■□□ 2.49
TMEM55B-202ENST00000398020 SSC5DA1L4H1 1573 aa30.61■■■□□ 2.49
TMEM55B-202ENST00000398020 CEP350Q5VT06 3117 aa30.61■■■□□ 2.49
TMEM55B-202ENST00000398020 MBD4O95243 580 aa30.6■■■□□ 2.49
TMEM55B-202ENST00000398020 ZFYP08048 801 aaPredicted RBP30.6■■■□□ 2.49
TMEM55B-202ENST00000398020 LRRFIP1Q32MZ4 808 aaKnown RBP30.6■■■□□ 2.49
TMEM55B-202ENST00000398020 MAPKAPK5Q8IW41 473 aa30.6■■■□□ 2.49
TMEM55B-202ENST00000398020 ENTPD3O75355 529 aa30.59■■■□□ 2.49
TMEM55B-202ENST00000398020 NF2P35240 595 aa30.59■■■□□ 2.49
TMEM55B-202ENST00000398020 MOB2Q70IA6 237 aa30.59■■■□□ 2.49
TMEM55B-202ENST00000398020 OSBP2Q969R2 916 aa30.59■■■□□ 2.49
TMEM55B-202ENST00000398020 GBA2Q9HCG7 927 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms