RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ATG3Q9NT62 314 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 NEDD4P46934 1319 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 PRC1O43663 620 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 KCNG4Q8TDN1 519 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 ZBTB3Q9H5J0 574 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 GPR108Q9NPR9 543 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 MYSM1Q5VVJ2 828 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 SRLQ86TD4 932 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 FBXO18Q8NFZ0 1043 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 LCMT1Q9UIC8 334 aa18.42■□□□□ 0.54
CHMP1A-201ENST00000397901 PPP1R13BQ96KQ4 1090 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 AK7Q96M32 723 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 IMPACTQ9P2X3 320 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 CPLX1O14810 134 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 FOXP2O15409 715 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 ZNF202O95125 648 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 SFPQP23246 707 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 ADORA1P30542 326 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 IMMTQ16891 758 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 UBXN4Q92575 508 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 POLR3EQ9NVU0 708 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 HPS5Q9UPZ3 1129 aa18.41■□□□□ 0.54
CHMP1A-201ENST00000397901 YEATS4O95619 227 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 TPM1P09493 284 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 FGAP02671 866 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 OAS2P29728 719 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 MARCKSP29966 332 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 EVCP57679 992 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 TMX1Q9H3N1 280 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 PSD3Q9NYI0 1048 aa18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 RRP15Q9Y3B9 282 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-201ENST00000397901 PFKFB1P16118 471 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 NLRP12P59046 1061 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 A1BGP04217 495 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 GYS2P54840 703 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 ANTXR2P58335 489 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 ANO1Q5XXA6 986 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 IQUBQ8NA54 791 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 MYCBPQ99417 103 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 BPIFA3Q9BQP9 254 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 STRN4Q9NRL3 753 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
CHMP1A-201ENST00000397901 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 GUCY2CP25092 1073 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 NCAPHQ15003 741 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 MB21D2Q8IYB1 491 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 SCARF1Q14162 830 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 EXOC4Q96A65 974 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 NCAPGQ9BPX3 1015 aa18.38■□□□□ 0.53
CHMP1A-201ENST00000397901 LOC102724159A0A0B4J2E5 919 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 PWP2Q15269 919 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 PI16Q6UXB8 463 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 FBXL16Q8N461 479 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 SRRTQ9BXP5 876 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 PUS7LQ9H0K6 701 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 PSEN1P49768 467 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 FANCCQ00597 558 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
CHMP1A-201ENST00000397901 KCNJ6P48051 423 aa18.36■□□□□ 0.53
CHMP1A-201ENST00000397901 EVA1CP58658 441 aa18.36■□□□□ 0.53
CHMP1A-201ENST00000397901 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
CHMP1A-201ENST00000397901 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
CHMP1A-201ENST00000397901 RXRAP19793 462 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 ZAP70P43403 619 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 PTPN21Q16825 1174 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 ZCCHC17Q9NP64 241 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 CIAO1O76071 339 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 CMA1P23946 247 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 MNS1Q8NEH6 495 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 TJP1Q07157 1748 aa18.35■□□□□ 0.53
CHMP1A-201ENST00000397901 NRDCO43847 1150 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms