RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SCN4AP35499 1836 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 MAGEB6P1A0A0J9YX57 407 aa28.41■■■□□ 2.14
TSPAN4-203ENST00000397397 BAG3O95817 575 aa28.41■■■□□ 2.14
TSPAN4-203ENST00000397397 CASC1Q6TDU7 716 aa28.41■■■□□ 2.14
TSPAN4-203ENST00000397397 ADARB2Q9NS39 739 aaKnown RBP28.41■■■□□ 2.14
TSPAN4-203ENST00000397397 IQCA1LA6NCM1 817 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 SPDYE2BA6NHP3 402 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 M0R2C6 588 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 SPDYE6P0CI01 402 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 DYNLL1P63167 89 aaKnown RBP28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 KIF4BQ2VIQ3 1234 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 APOBEC3HQ6NTF7 200 aaKnown RBP28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 RUFY2Q8WXA3 655 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 AIDAQ96BJ3 306 aa28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 PRMT6Q96LA8 375 aaPredicted RBP28.4■■■□□ 2.14
TSPAN4-203ENST00000397397 EGFRP00533 1210 aa28.39■■■□□ 2.14
TSPAN4-203ENST00000397397 MCMDC2Q4G0Z9 681 aa28.39■■■□□ 2.14
TSPAN4-203ENST00000397397 MBD4O95243 580 aa28.38■■■□□ 2.13
TSPAN4-203ENST00000397397 PPP4CP60510 307 aa28.38■■■□□ 2.13
TSPAN4-203ENST00000397397 TRPM4Q8TD43 1214 aa28.38■■■□□ 2.13
TSPAN4-203ENST00000397397 ZBED3Q96IU2 234 aaPredicted RBP28.38■■■□□ 2.13
TSPAN4-203ENST00000397397 TOMM70O94826 608 aa28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 EPHX2P34913 555 aa28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 LCORLQ8N3X6 602 aa28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 RIOK1Q9BRS2 568 aaKnown RBP28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 ARMT1Q9H993 441 aa28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 USP40Q9NVE5 1235 aa28.37■■■□□ 2.13
TSPAN4-203ENST00000397397 WNT10BO00744 389 aa28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 PLCG2P16885 1265 aa28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 NBPF9Q3BBW0 867 aa28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 CCDC129Q6ZRS4 1044 aa28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 CERS3Q8IU89 383 aa28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 TDRD3Q9H7E2 651 aaKnown RBP28.36■■■□□ 2.13
TSPAN4-203ENST00000397397 GPAA1O43292 621 aa28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 VEGFAP15692 232 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 CDC42EP5Q6NZY7 148 aa28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 SH3RF3Q8TEJ3 882 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 TAF1DQ9H5J8 278 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 ECM29Q5VYK3 1845 aa28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 MYO1BO43795 1136 aa28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 STRBPQ96SI9 672 aaKnown RBP28.35■■■□□ 2.13
TSPAN4-203ENST00000397397 RAD50Q92878 1312 aa28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 HIRAP54198 1017 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 RHBDL3P58872 404 aa28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 ZNF589Q86UQ0 364 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 TEX11Q8IYF3 940 aa28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 ESYT1Q9BSJ8 1104 aa28.34■■■□□ 2.13
TSPAN4-203ENST00000397397 CCDC171Q6TFL3 1326 aa28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 CLRN2A0PK11 232 aa28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 SGSM2O43147 1006 aa28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 MFAP1P55081 439 aaKnown RBP28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 USP50Q70EL3 339 aaPredicted RBP28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 IL25Q9H293 177 aa28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 ZNF70Q9UC06 446 aaPredicted RBP28.33■■■□□ 2.13
TSPAN4-203ENST00000397397 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
TSPAN4-203ENST00000397397 CRNKL1Q9BZJ0 848 aaKnown RBP28.32■■■□□ 2.12
TSPAN4-203ENST00000397397 TMOD2Q9NZR1 351 aa28.32■■■□□ 2.12
TSPAN4-203ENST00000397397 SPDYE2Q495Y8 402 aa28.31■■■□□ 2.12
TSPAN4-203ENST00000397397 SLC4A4Q9Y6R1 1079 aa28.31■■■□□ 2.12
TSPAN4-203ENST00000397397 CDK5RAP2Q96SN8 1893 aa28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 CACNB3P54284 484 aa28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 EAPPQ56P03 285 aaPredicted RBP28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 PNMA8AQ86V59 439 aaPredicted RBP28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 VEZTQ9HBM0 779 aa28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 ASTN2O75129 1339 aaPredicted RBP28.3■■■□□ 2.12
TSPAN4-203ENST00000397397 PRKAB2O43741 272 aa28.29■■■□□ 2.12
TSPAN4-203ENST00000397397 GNAT2P19087 354 aa28.29■■■□□ 2.12
TSPAN4-203ENST00000397397 USP5P45974 858 aa28.29■■■□□ 2.12
TSPAN4-203ENST00000397397 TGFBRAP1Q8WUH2 860 aa28.28■■■□□ 2.12
TSPAN4-203ENST00000397397 WDHD1O75717 1129 aaPredicted RBP28.27■■■□□ 2.12
TSPAN4-203ENST00000397397 C8orf34Q49A92 452 aa28.27■■■□□ 2.12
TSPAN4-203ENST00000397397 SDR42E1Q8WUS8 393 aa28.27■■■□□ 2.12
TSPAN4-203ENST00000397397 FOCADQ5VW36 1801 aa28.27■■■□□ 2.12
TSPAN4-203ENST00000397397 PICALMQ13492 652 aa28.26■■■□□ 2.12
TSPAN4-203ENST00000397397 VPS53Q5VIR6 699 aa28.26■■■□□ 2.12
TSPAN4-203ENST00000397397 ANGEL2Q5VTE6 544 aaKnown RBP28.26■■■□□ 2.12
TSPAN4-203ENST00000397397 GGA3Q9NZ52 723 aa28.26■■■□□ 2.12
TSPAN4-203ENST00000397397 TCP10L2B9ZVM9 353 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 PATL2C9JE40 543 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 APPP05067 770 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 NFIAQ12857 509 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 KIAA1211Q6ZU35 1233 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 MAPKAPK5Q8IW41 473 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 IDI2Q9BXS1 227 aa28.26■■■□□ 2.11
TSPAN4-203ENST00000397397 GSG1L2A8MUP6 293 aa28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 POTEIP0CG38 1075 aa28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 POTEJP0CG39 1038 aa28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 HSPD1P10809 573 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 DDX4Q9NQI0 724 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 CLEC11AQ9Y240 323 aa28.25■■■□□ 2.11
TSPAN4-203ENST00000397397 HSPA6P17066 643 aa28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 FKBP1CQ5VVH2 108 aa28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 ZC3H15Q8WU90 426 aaKnown RBP28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 ANO2Q9NQ90 1003 aa28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 ATP8A2Q9NTI2 1148 aa28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 FAM198AQ9UFP1 575 aa28.24■■■□□ 2.11
TSPAN4-203ENST00000397397 RPAP1Q9BWH6 1393 aaPredicted RBP28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 FLT1P17948 1338 aa28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 NAV1Q8NEY1 1877 aa28.23■■■□□ 2.11
TSPAN4-203ENST00000397397 TCP10Q12799 353 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms