RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 VPS54Q9P1Q0 977 aa16.84■□□□□ 0.29
CYTH3-202ENST00000396741 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
CYTH3-202ENST00000396741 GLI2P10070 1586 aa16.83■□□□□ 0.29
CYTH3-202ENST00000396741 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.29
CYTH3-202ENST00000396741 IGKV5-2P06315 115 aa16.83■□□□□ 0.29
CYTH3-202ENST00000396741 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.29
CYTH3-202ENST00000396741 SSH2Q76I76 1423 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 SNAP23O00161 211 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 RIOK3O14730 519 aaKnown RBP16.83■□□□□ 0.28
CYTH3-202ENST00000396741 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
CYTH3-202ENST00000396741 ELP1O95163 1332 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
CYTH3-202ENST00000396741 PDE6AP16499 860 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 CDR1P51861 262 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 CTSWP56202 376 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 ARID5AQ03989 594 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 MCM6Q14566 821 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 HIBADHP31937 336 aaKnown RBP16.82■□□□□ 0.28
CYTH3-202ENST00000396741 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
CYTH3-202ENST00000396741 AMPD3Q01432 767 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 SF3B2Q13435 895 aaKnown RBP16.82■□□□□ 0.28
CYTH3-202ENST00000396741 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
CYTH3-202ENST00000396741 ZC3H12CQ9C0D7 883 aaKnown RBP16.82■□□□□ 0.28
CYTH3-202ENST00000396741 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.289e-7■■■■■ 27.6
CYTH3-202ENST00000396741 KIF2CQ99661 725 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 PRM3Q9NNZ6 103 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 PNPLA6Q8IY17 1366 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 VPS16Q9H269 839 aa16.82■□□□□ 0.28
CYTH3-202ENST00000396741 CYP27B1O15528 508 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 SLU7O95391 586 aaKnown RBP16.81■□□□□ 0.28
CYTH3-202ENST00000396741 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 POLA2Q14181 598 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 FEZ1Q99689 392 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
CYTH3-202ENST00000396741 ST5P78524 1137 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 ARAP3Q8WWN8 1544 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 PSMA7O14818 248 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 BMP15O95972 392 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 USP8P40818 1118 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 FANCCQ00597 558 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 ZNF827Q17R98 1081 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 PPP1R9BQ96SB3 815 aa16.81■□□□□ 0.28
CYTH3-202ENST00000396741 PUF60Q9UHX1 559 aaKnown RBP16.81■□□□□ 0.28
CYTH3-202ENST00000396741 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
CYTH3-202ENST00000396741 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 USP17L12C9JPN9 530 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 USP17L21D6R901 530 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 TOM1O60784 492 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 DEXIO95424 95 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 SSR1P43307 286 aaKnown RBP16.8■□□□□ 0.28
CYTH3-202ENST00000396741 IQUBQ8NA54 791 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
CYTH3-202ENST00000396741 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 GOLGA6L10A6NI86 522 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
CYTH3-202ENST00000396741 GNAQP50148 359 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 GSTO1P78417 241 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 PNOCQ13519 176 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 TAX1BP1Q86VP1 789 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 BTBD18B2RXH4 712 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 PTPN21Q16825 1174 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 PARP10Q53GL7 1025 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 AKNAD1Q5T1N1 836 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 DTHD1Q6ZMT9 781 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 NFE2L3Q9Y4A8 694 aa16.8■□□□□ 0.28
CYTH3-202ENST00000396741 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 PFKFB2O60825 505 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 FAM182BQ5T319 152 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 OSBP2Q969R2 916 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 NRBP1Q9UHY1 535 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 CCNL1Q9UK58 526 aaPredicted RBP16.79■□□□□ 0.28
CYTH3-202ENST00000396741 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 RTL9Q8NET4 1388 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 DENND2AQ9ULE3 1009 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 MAST3O60307 1309 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 TMCO5BA8MYB1 307 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 CALML3P27482 149 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 PAFAH1B1P43034 410 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 UBXN1Q04323 297 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 PCDHA7Q9UN72 937 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
CYTH3-202ENST00000396741 PPP1R12BO60237 982 aaPredicted RBP16.78■□□□□ 0.28
CYTH3-202ENST00000396741 CALM1P0DP23 149 aa16.78■□□□□ 0.28
CYTH3-202ENST00000396741 CALM2P0DP24 149 aa16.78■□□□□ 0.28
CYTH3-202ENST00000396741 CALM3P0DP25 149 aa16.78■□□□□ 0.28
CYTH3-202ENST00000396741 CUL5Q93034 780 aa16.78■□□□□ 0.28
CYTH3-202ENST00000396741 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
CYTH3-202ENST00000396741 NYXQ9GZU5 481 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms