RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 KRT32Q14532 448 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 CEP135Q66GS9 1140 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 CCAR2Q8N163 923 aaKnown RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 PDILTQ8N807 584 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 C8orf76Q96K31 380 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 IFNKQ9P0W0 207 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 DDX60Q8IY21 1712 aaKnown RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 DDB1Q16531 1140 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 SYNE3Q6ZMZ3 975 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 NFXL1Q6ZNB6 911 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 DZIP3Q86Y13 1208 aaKnown RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 TRERF1Q96PN7 1200 aa10.81□□□□□ -0.68
NDE1-201ENST00000396354 ZNF215Q9UL58 517 aaPredicted RBP10.81□□□□□ -0.68
NDE1-201ENST00000396354 RNF113AO15541 343 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 SUSD4Q5VX71 490 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 HMG20BQ9P0W2 317 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 PCDHA7Q9UN72 937 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 TERF1P54274 439 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 PTPN14Q15678 1187 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 ZNF34Q8IZ26 560 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 NBPF3Q9H094 633 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 ALDH8A1Q9H2A2 487 aaPredicted RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 CDHR2Q9BYE9 1310 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 hCG_1642624A0A1W2PR95 340 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 ATP1A3P13637 1013 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 PHKA1P46020 1223 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 NCBP1Q09161 790 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 ELF2Q15723 593 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 FAM182BQ5T319 152 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
NDE1-201ENST00000396354 PIH1D3Q9NQM4 214 aaKnown RBP10.8□□□□□ -0.68
NDE1-201ENST00000396354 PRC1O43663 620 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 EIF5P55010 431 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 EXOSC10Q01780 885 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 STX1AQ16623 288 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 METTL24Q5JXM2 366 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 LDHAL6AQ6ZMR3 332 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 CEP57L1Q8IYX8 460 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 SENP2Q9HC62 589 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 SPTLC3Q9NUV7 552 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 PRDM4Q9UKN5 801 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 RREB1Q92766 1687 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 COBLO75128 1261 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 ZNF827Q17R98 1081 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 SYT10Q6XYQ8 523 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 SLC51AQ86UW1 340 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 LRRC8AQ8IWT6 810 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 GJD4Q96KN9 370 aaPredicted RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 XPO4Q9C0E2 1151 aaKnown RBP10.79□□□□□ -0.68
NDE1-201ENST00000396354 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
NDE1-201ENST00000396354 CASZ1Q86V15 1759 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 FGAP02671 866 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 LRRN4CLQ8ND94 238 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 DSCC1Q9BVC3 393 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 EPC1Q9H2F5 836 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 B4E1Z4 1266 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 CAMTA2O94983 1202 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 IL6STP40189 918 aaPredicted RBP10.78□□□□□ -0.68
NDE1-201ENST00000396354 WWC3Q9ULE0 1092 aa10.78□□□□□ -0.68
NDE1-201ENST00000396354 SERPINC1P01008 464 aa10.77□□□□□ -0.68
NDE1-201ENST00000396354 ATP6V1AP38606 617 aa10.77□□□□□ -0.68
NDE1-201ENST00000396354 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.68
NDE1-201ENST00000396354 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.68
NDE1-201ENST00000396354 TRPC5Q9UL62 973 aaPredicted RBP10.77□□□□□ -0.68
NDE1-201ENST00000396354 TACC3Q9Y6A5 838 aa10.77□□□□□ -0.68
NDE1-201ENST00000396354 LOC102724428A0A0B4J2F2 783 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 SIK1P57059 783 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 ANTXR2P58335 489 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 PDE4CQ08493 712 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 SLC9C2Q5TAH2 1124 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
NDE1-201ENST00000396354 NUP133Q8WUM0 1156 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 ZNF396Q96N95 335 aaPredicted RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 FDPSP14324 419 aaKnown RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 FAM160A1Q05DH4 1040 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 PNOCQ13519 176 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 IMMTQ16891 758 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms