RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
PFDN6-205ENST00000395134 RPUSD2Q8IZ73 545 aaKnown RBP11.38□□□□□ -0.59
PFDN6-205ENST00000395134 NLGN2Q8NFZ4 835 aa11.38□□□□□ -0.59
PFDN6-205ENST00000395134 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
PFDN6-205ENST00000395134 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
PFDN6-205ENST00000395134 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
PFDN6-205ENST00000395134 PRKAB1Q9Y478 270 aa11.38□□□□□ -0.59
PFDN6-205ENST00000395134 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
PFDN6-205ENST00000395134 PPP1R12AO14974 1030 aaPredicted RBP11.37□□□□□ -0.59
PFDN6-205ENST00000395134 STAU1O95793 577 aaKnown RBP11.37□□□□□ -0.59
PFDN6-205ENST00000395134 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
PFDN6-205ENST00000395134 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 RAB15P59190 212 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 FOXK2Q01167 660 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 GPR162Q16538 588 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 SMIM5Q71RC9 77 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 ZNF784Q8NCA9 323 aaPredicted RBP11.37□□□□□ -0.59
PFDN6-205ENST00000395134 SEC16BQ96JE7 1060 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 C12orf49Q9H741 205 aa11.37□□□□□ -0.59
PFDN6-205ENST00000395134 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 OPLAHO14841 1288 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 GIPC1O14908 333 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 ERVK-9P63128 1117 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 TMED8Q6PL24 325 aaPredicted RBP11.36□□□□□ -0.59
PFDN6-205ENST00000395134 COL23A1Q86Y22 540 aaPredicted RBP11.36□□□□□ -0.59
PFDN6-205ENST00000395134 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
PFDN6-205ENST00000395134 TMX1Q9H3N1 280 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
PFDN6-205ENST00000395134 TBCELQ5QJ74 424 aa11.35□□□□□ -0.59
PFDN6-205ENST00000395134 ERMP1Q7Z2K6 904 aa11.35□□□□□ -0.59
PFDN6-205ENST00000395134 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
PFDN6-205ENST00000395134 KCTD15Q96SI1 283 aaPredicted RBP11.35□□□□□ -0.59
PFDN6-205ENST00000395134 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
PFDN6-205ENST00000395134 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
PFDN6-205ENST00000395134 SCHIP1Q9P0W5 487 aaPredicted RBP11.35□□□□□ -0.59
PFDN6-205ENST00000395134 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
PFDN6-205ENST00000395134 MYH14Q7Z406 1995 aaKnown RBP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 ST13P50502 369 aaKnown RBP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 PSMA6P60900 246 aaKnown RBP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 NFX1Q12986 1120 aaKnown RBP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 MEI1Q5TIA1 1274 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
PFDN6-205ENST00000395134 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 ZNF408Q9H9D4 720 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 NCAPD2Q15021 1401 aa11.34□□□□□ -0.59
PFDN6-205ENST00000395134 ERVH48-1M5A8F1 160 aa11.33□□□□□ -0.6
PFDN6-205ENST00000395134 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
PFDN6-205ENST00000395134 MORC4Q8TE76 937 aa11.33□□□□□ -0.6
PFDN6-205ENST00000395134 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
PFDN6-205ENST00000395134 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
PFDN6-205ENST00000395134 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
PFDN6-205ENST00000395134 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
PFDN6-205ENST00000395134 PCSK2P16519 638 aa11.32□□□□□ -0.6
PFDN6-205ENST00000395134 ZAP70P43403 619 aa11.32□□□□□ -0.6
PFDN6-205ENST00000395134 PIGBQ92521 554 aa11.32□□□□□ -0.6
PFDN6-205ENST00000395134 OSBPL7Q9BZF2 842 aa11.32□□□□□ -0.6
PFDN6-205ENST00000395134 POLKQ9UBT6 870 aa11.32□□□□□ -0.6
PFDN6-205ENST00000395134 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
PFDN6-205ENST00000395134 A6NJY4 79 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 PEX14O75381 377 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 C11orf91Q3C1V1 193 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
PFDN6-205ENST00000395134 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 COPRSQ9NQ92 184 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 C4AP0C0L4 1744 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
PFDN6-205ENST00000395134 S100BP04271 92 aaPredicted RBP11.3□□□□□ -0.6
PFDN6-205ENST00000395134 AMPD3Q01432 767 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 MTFR1Q15390 333 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 TRIM55Q9BYV6 548 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 PANK3Q9H999 370 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 G3BP2Q9UN86 482 aaKnown RBP11.3□□□□□ -0.6
PFDN6-205ENST00000395134 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 CHMP3Q9Y3E7 222 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
PFDN6-205ENST00000395134 PBX2P40425 430 aa11.29□□□□□ -0.6
PFDN6-205ENST00000395134 LRP10Q7Z4F1 713 aa11.29□□□□□ -0.6
PFDN6-205ENST00000395134 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
PFDN6-205ENST00000395134 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
PFDN6-205ENST00000395134 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
PFDN6-205ENST00000395134 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 KLF4O43474 513 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 PHKG2P15735 406 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms