RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 KRT23Q9C075 422 aa26.11■■□□□ 1.77
HMGA2-203ENST00000393578 ANGEL1Q9UNK9 670 aaKnown RBP26.11■■□□□ 1.77
HMGA2-203ENST00000393578 LRRC37AA6NMS7 1700 aa26.1■■□□□ 1.77
HMGA2-203ENST00000393578 FOXD4L6Q3SYB3 417 aaPredicted RBP26.1■■□□□ 1.77
HMGA2-203ENST00000393578 FOXD4L3Q6VB84 417 aaPredicted RBP26.1■■□□□ 1.77
HMGA2-203ENST00000393578 SP8Q8IXZ3 490 aa26.1■■□□□ 1.77
HMGA2-203ENST00000393578 SDR42E1Q8WUS8 393 aa26.1■■□□□ 1.77
HMGA2-203ENST00000393578 BRPF3Q9ULD4 1205 aa26.1■■□□□ 1.77
HMGA2-203ENST00000393578 CHD4Q14839 1912 aa26.1■■□□□ 1.77
HMGA2-203ENST00000393578 KLF18A0A0U1RQI7 1052 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 CTDNEP1O95476 244 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 SRGNP10124 158 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 PDE6BP35913 854 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 DYNLL1P63167 89 aaKnown RBP26.09■■□□□ 1.77
HMGA2-203ENST00000393578 GIMAP6Q6P9H5 292 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 KIF3AQ9Y496 699 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 CCDC88AQ3V6T2 1871 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 PPEF1O14829 653 aaPredicted RBP26.09■■□□□ 1.77
HMGA2-203ENST00000393578 NPR1P16066 1061 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 RNF41Q9H4P4 317 aaPredicted RBP26.09■■□□□ 1.77
HMGA2-203ENST00000393578 NCOA5Q9HCD5 579 aaKnown RBP26.09■■□□□ 1.77
HMGA2-203ENST00000393578 ANAPC4Q9UJX5 808 aa26.09■■□□□ 1.77
HMGA2-203ENST00000393578 DHX16O60231 1041 aaKnown RBP26.08■■□□□ 1.77
HMGA2-203ENST00000393578 CDC37L1Q7L3B6 337 aa26.08■■□□□ 1.77
HMGA2-203ENST00000393578 FAM184AQ8NB25 1140 aa26.08■■□□□ 1.77
HMGA2-203ENST00000393578 TMEM87AQ8NBN3 555 aa26.08■■□□□ 1.77
HMGA2-203ENST00000393578 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
HMGA2-203ENST00000393578 PTPDC1A2A3K4 754 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 SH2B2O14492 632 aaPredicted RBP26.07■■□□□ 1.76
HMGA2-203ENST00000393578 PPARAQ07869 468 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 DZIP1Q86YF9 867 aaKnown RBP26.07■■□□□ 1.76
HMGA2-203ENST00000393578 NKX2-3Q8TAU0 364 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 TBC1D16Q8TBP0 767 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 ATP6V0A2Q9Y487 856 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 GOLGA8BA8MQT2 603 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 LDHBP07195 334 aaKnown RBP26.07■■□□□ 1.76
HMGA2-203ENST00000393578 IL1R1P14778 569 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 DDX11Q96FC9 970 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 CD209Q9NNX6 404 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 ZSWIM5Q9P217 1185 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 POLLQ9UGP5 575 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 HPS5Q9UPZ3 1129 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 JAG2Q9Y219 1238 aa26.07■■□□□ 1.76
HMGA2-203ENST00000393578 LTBP1Q14766 1721 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 MBD3O95983 291 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 GPT2Q8TD30 523 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 IGDCC4Q8TDY8 1250 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 CAMKK2Q96RR4 588 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 INCENPQ9NQS7 918 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 TACC3Q9Y6A5 838 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 KIAA1551Q9HCM1 1747 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 KDM4AO75164 1064 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 ALDH1B1P30837 517 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 USP48Q86UV5 1035 aa26.06■■□□□ 1.76
HMGA2-203ENST00000393578 CRNKL1Q9BZJ0 848 aaKnown RBP26.06■■□□□ 1.76
HMGA2-203ENST00000393578 AATFQ9NY61 560 aaKnown RBP eCLIP26.05■■□□□ 1.76
HMGA2-203ENST00000393578 CNPY2Q9Y2B0 182 aa26.05■■□□□ 1.76
HMGA2-203ENST00000393578 TCHHQ07283 1943 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 NCLP19338 710 aaKnown RBP26.04■■□□□ 1.76
HMGA2-203ENST00000393578 LIFRP42702 1097 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 SLC15A2Q16348 729 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 MTA3Q9BTC8 594 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 DUOX1Q9NRD9 1551 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 MINDY4BA8MYZ0 360 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 GSTO1P78417 241 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 EZH2Q15910 746 aaKnown RBP26.04■■□□□ 1.76
HMGA2-203ENST00000393578 MSL1Q68DK7 614 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 SGMS1Q86VZ5 419 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 GDPD2Q9HCC8 539 aa26.04■■□□□ 1.76
HMGA2-203ENST00000393578 C6orf229H3BNL8 230 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 H3BQV1 296 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 CSPP1Q1MSJ5 1256 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 TMEM67Q5HYA8 995 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 IFFO2Q5TF58 517 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 MASTLQ96GX5 879 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 LY9Q9HBG7 655 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 ATP8A2Q9NTI2 1148 aa26.03■■□□□ 1.76
HMGA2-203ENST00000393578 DNM1Q05193 864 aaKnown RBP26.02■■□□□ 1.76
HMGA2-203ENST00000393578 EN1Q05925 392 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-203ENST00000393578 ANO8Q9HCE9 1232 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-203ENST00000393578 FSD2A1L4K1 749 aa26.02■■□□□ 1.76
HMGA2-203ENST00000393578 FERMT3Q86UX7 667 aa26.02■■□□□ 1.76
HMGA2-203ENST00000393578 ISY1Q9ULR0 285 aaKnown RBP26.02■■□□□ 1.76
HMGA2-203ENST00000393578 IFIT3O14879 490 aaKnown RBP26.01■■□□□ 1.75
HMGA2-203ENST00000393578 PCP11498 1178 aaKnown RBP26.01■■□□□ 1.75
HMGA2-203ENST00000393578 SART3Q15020 963 aaKnown RBP26.01■■□□□ 1.75
HMGA2-203ENST00000393578 CAVIN1Q6NZI2 390 aaKnown RBP26.01■■□□□ 1.75
HMGA2-203ENST00000393578 APOA5Q6Q788 366 aa26.01■■□□□ 1.75
HMGA2-203ENST00000393578 TOMM22Q9NS69 142 aa26.01■■□□□ 1.75
HMGA2-203ENST00000393578 STK32BQ9NY57 414 aa26.01■■□□□ 1.75
HMGA2-203ENST00000393578 QSER1Q2KHR3 1735 aa26.01■■□□□ 1.75
HMGA2-203ENST00000393578 GOLGA6L3A6NEY3 463 aa26■■□□□ 1.75
HMGA2-203ENST00000393578 RRP12Q5JTH9 1297 aaKnown RBP26■■□□□ 1.75
HMGA2-203ENST00000393578 CTR9Q6PD62 1173 aa26■■□□□ 1.75
HMGA2-203ENST00000393578 DCP1AQ9NPI6 582 aaPredicted RBP26■■□□□ 1.75
HMGA2-203ENST00000393578 CPLX1O14810 134 aa26■■□□□ 1.75
HMGA2-203ENST00000393578 ZSCAN16Q9H4T2 348 aaPredicted RBP26■■□□□ 1.75
HMGA2-203ENST00000393578 COL11A2P13942 1736 aaPredicted RBP26■■□□□ 1.75
HMGA2-203ENST00000393578 LDHCP07864 332 aa25.99■■□□□ 1.75
HMGA2-203ENST00000393578 NFXL1Q6ZNB6 911 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms