RNA–Protein interactions for RNA: ENST00000391858.8

SPRTN-204, Transcript of SprT-like N-terminal domain, humanhuman

TSL 1 (best) BASIC

Gene SPRTN, Length 3,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-204ENST00000391858 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
SPRTN-204ENST00000391858 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
SPRTN-204ENST00000391858 PES1O00541 588 aaKnown RBP13.13□□□□□ -0.31
SPRTN-204ENST00000391858 CDC27P30260 824 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
SPRTN-204ENST00000391858 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
SPRTN-204ENST00000391858 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 KIRREL3Q8IZU9 778 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 OTUD6BQ8N6M0 293 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 HNRNPLLQ8WVV9 542 aaKnown RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 ASXL2Q76L83 1435 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 A1BGP04217 495 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 KCNV1Q6PIU1 500 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 TEX33O43247 280 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 RXRAP19793 462 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
SPRTN-204ENST00000391858 NAPGQ99747 312 aaPredicted RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
SPRTN-204ENST00000391858 KCNQ3O43525 872 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
SPRTN-204ENST00000391858 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 EYA1Q99502 592 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
SPRTN-204ENST00000391858 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 CARMIL3Q8ND23 1372 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
SPRTN-204ENST00000391858 ATP1A2P50993 1020 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 RBL2Q08999 1139 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 LRCH2Q5VUJ6 765 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
SPRTN-204ENST00000391858 NF2P35240 595 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPRTN-204ENST00000391858 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
SPRTN-204ENST00000391858 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 KIF28PB7ZC32 967 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
SPRTN-204ENST00000391858 RAB21Q9UL25 225 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 NEURL4Q96JN8 1562 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 IRAK1P51617 712 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPRTN-204ENST00000391858 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 ATP2C2O75185 946 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
SPRTN-204ENST00000391858 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
SPRTN-204ENST00000391858 CMA1P23946 247 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 USP5P45974 858 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 KCTD16Q68DU8 428 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 EDC4Q6P2E9 1401 aaKnown RBP13.09□□□□□ -0.31
SPRTN-204ENST00000391858 KLF18A0A0U1RQI7 1052 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 CASP14P31944 242 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
SPRTN-204ENST00000391858 TRIM10Q9UDY6 481 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 GOLGA6BA6NDN3 693 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 MCMDC2Q4G0Z9 681 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 CABS1Q96KC9 395 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
SPRTN-204ENST00000391858 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.09□□□□□ -0.31
SPRTN-204ENST00000391858 PTPRMP28827 1452 aa13.08□□□□□ -0.31
SPRTN-204ENST00000391858 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
SPRTN-204ENST00000391858 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
SPRTN-204ENST00000391858 GOLIM4O00461 696 aa13.08□□□□□ -0.32
SPRTN-204ENST00000391858 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
SPRTN-204ENST00000391858 CPP00450 1065 aa13.08□□□□□ -0.32
SPRTN-204ENST00000391858 PDCLQ13371 301 aa13.08□□□□□ -0.32
SPRTN-204ENST00000391858 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.32
SPRTN-204ENST00000391858 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
SPRTN-204ENST00000391858 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms