RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 ZNF287Q9HBT7 754 aa11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 COL11A2P13942 1736 aaPredicted RBP11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
TRBV11-1-201ENST00000390367 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 MMP14P50281 582 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 SART3Q15020 963 aaKnown RBP11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 AOC3Q16853 763 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 HHIPL2Q6UWX4 724 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 HDAC9Q9UKV0 1011 aa11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
TRBV11-1-201ENST00000390367 SLX4Q8IY92 1834 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 GPR75-ASB3A0A0A6YYF3 556 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 ERICH2A1L162 156 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 AK2P54819 239 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 HAND2P61296 217 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 INTS4Q96HW7 963 aaKnown RBP11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 CCDC88AQ3V6T2 1871 aa11.66□□□□□ -0.54
TRBV11-1-201ENST00000390367 MINDY4BA8MYZ0 360 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 PTGER2P43116 358 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 BTDP43251 543 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 DYNLL1P63167 89 aaKnown RBP11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 PDE4BQ07343 736 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 PPARAQ07869 468 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 Q6ZUG5 572 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 ADGRA1Q86SQ6 560 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 TMX3Q96JJ7 454 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 TTC14Q96N46 770 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 LTBP1Q14766 1721 aa11.65□□□□□ -0.54
TRBV11-1-201ENST00000390367 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.55
TRBV11-1-201ENST00000390367 F8W031 263 aaPredicted RBP11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 PRKAB2O43741 272 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 POLR3DP05423 398 aaPredicted RBP11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 RBM5P52756 815 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 NUCB2P80303 420 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 TNIP1Q15025 636 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 NOL8Q76FK4 1167 aaKnown RBP11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 TEX11Q8IYF3 940 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 SDR42E1Q8WUS8 393 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 ESR2Q92731 530 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 DLEC1Q9Y238 1755 aa11.64□□□□□ -0.55
TRBV11-1-201ENST00000390367 GAKO14976 1311 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 DACT2Q5SW24 774 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 FBXL16Q8N461 479 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 TMOD2Q9NZR1 351 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 SERPINA10Q9UK55 444 aa11.63□□□□□ -0.55
TRBV11-1-201ENST00000390367 LTBP3Q9NS15 1303 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 USP17L21D6R901 530 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 FOXP2O15409 715 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 PRC1O43663 620 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 CRKP46108 304 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 EXOSC10Q01780 885 aaKnown RBP11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 CUL4AQ13619 759 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 IQCA1Q86XH1 822 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
TRBV11-1-201ENST00000390367 ZNF384Q8TF68 577 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms