RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TAOK2Q9UL54 1235 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 BCL9O00512 1426 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 BIN1O00499 593 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 URI1O94763 535 aaPredicted RBP20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 FDPSP14324 419 aaKnown RBP20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 GSDMDP57764 484 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 IMMTQ16891 758 aaKnown RBP20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 SLC9C2Q5TAH2 1124 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 TMX1Q9H3N1 280 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 GJB4Q9NTQ9 266 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
SQSTM1-202ENST00000389805 SFPQP23246 707 aaKnown RBP eCLIP20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 PHKA1P46020 1223 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 ME1P48163 572 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 PTPN21Q16825 1174 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 FSIP1Q8NA03 581 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 MNS1Q8NEH6 495 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 TNNT3P45378 269 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 SDF4Q9BRK5 362 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 ZSCAN16Q9H4T2 348 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 CARD6Q9BX69 1037 aa20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 ORC3Q9UBD5 711 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-202ENST00000389805 CDHR2Q9BYE9 1310 aa20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 PRC1O43663 620 aa20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ZRANB2O95218 330 aaKnown RBP eCLIP20.42■□□□□ 0.861e-11■■□□□ 13.3
SQSTM1-202ENST00000389805 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ZNF274Q96GC6 653 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 TRIM66O15016 1216 aa20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ANTXR2P58335 489 aa20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ISM2Q6H9L7 571 aa20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ARGLU1Q9NWB6 273 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-202ENST00000389805 ITGB4P16144 1822 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 SALL1Q9NSC2 1324 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 CTAGE5O15320 804 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 PDE8BO95263 885 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 GOLGA8FQ08AF8 430 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 GOLGA8DPQ0D2H9 430 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 C10orf67Q8IYJ2 551 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 DPCR1Q3MIW9 517 aa20.41■□□□□ 0.86
SQSTM1-202ENST00000389805 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 A0A1B0GVL5 298 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 ZNF213O14771 459 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 SASH3O75995 380 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 APPP05067 770 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 OAS2P29728 719 aaKnown RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 CCDC102BQ68D86 513 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 CREBRFQ8IUR6 639 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 OSBPL5Q9H0X9 879 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 LCMT1Q9UIC8 334 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 TPM4P67936 248 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 FAM193AP78312 1265 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 INCENPQ9NQS7 918 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 PDE8AO60658 829 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 GNL2Q13823 731 aaKnown RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 MB21D2Q8IYB1 491 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 NBPF3Q9H094 633 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 RSPH14Q9UHP6 348 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 WWC3Q9ULE0 1092 aa20.4■□□□□ 0.86
SQSTM1-202ENST00000389805 ADD2P35612 726 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 SEC31BQ9NQW1 1179 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 CARMIL3Q8ND23 1372 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 FANCGO15287 622 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 ZRSR1Q15695 479 aaKnown RBP20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 SUSD4Q5VX71 490 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 TICAM2Q86XR7 235 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 HPS5Q9UPZ3 1129 aa20.39■□□□□ 0.85
SQSTM1-202ENST00000389805 DISP2A7MBM2 1401 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 RXRAP19793 462 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 ETF1P62495 437 aaKnown RBP20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 FAM160A1Q05DH4 1040 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 NAT10Q9H0A0 1025 aaKnown RBP20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 GOLGA8BA8MQT2 603 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 POLR3DP05423 398 aaPredicted RBP20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 RCOR1Q9UKL0 485 aa20.38■□□□□ 0.85
SQSTM1-202ENST00000389805 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 RALYLQ86SE5 291 aaKnown RBP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 ENGASEQ8NFI3 743 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 NCOA7Q8NI08 942 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 PSDA5PKW4 1024 aaPredicted RBP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 TBC1D10CQ8IV04 446 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 ZNF34Q8IZ26 560 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 TXLNBQ8N3L3 684 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 KCND1Q9NSA2 647 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 EVCP57679 992 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 ZSCAN26Q16670 478 aa20.37■□□□□ 0.85
SQSTM1-202ENST00000389805 CCDC150Q8NCX0 1101 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms