RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
SCFD2-201ENST00000388940 MAGEB6Q8N7X4 407 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 NEDD4P46934 1319 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 PNPLA7Q6ZV29 1317 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 KIF28PB7ZC32 967 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 NTSR2O95665 410 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 PTGS1P23219 599 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
SCFD2-201ENST00000388940 SIK1P57059 783 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 RAB11FIP4Q86YS3 637 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 MRFAP1L1Q96HT8 127 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
SCFD2-201ENST00000388940 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 CCDC186Q7Z3E2 898 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 C17orf53Q8N3J3 647 aaPredicted RBP17.38■□□□□ 0.37
SCFD2-201ENST00000388940 MYRIPQ8NFW9 859 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 ALG1Q9BT22 464 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 NAPBQ9H115 298 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 NID2Q14112 1375 aa17.38■□□□□ 0.37
SCFD2-201ENST00000388940 ZBTB43O43298 467 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 MBD4O95243 580 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 NDUFA8P51970 172 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 NTRK3Q16288 839 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 KRT23Q9C075 422 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 CMA1P23946 247 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 CDC27P30260 824 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 SLC39A14Q15043 492 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
SCFD2-201ENST00000388940 DHX40Q8IX18 779 aaKnown RBP17.37■□□□□ 0.37
SCFD2-201ENST00000388940 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
SCFD2-201ENST00000388940 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
SCFD2-201ENST00000388940 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 ITPK1Q13572 414 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
SCFD2-201ENST00000388940 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 GJB4Q9NTQ9 266 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 FAM217BQ9NTX9 383 aaPredicted RBP17.36■□□□□ 0.37
SCFD2-201ENST00000388940 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCFD2-201ENST00000388940 KRT40Q6A162 431 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 BPIFA3Q9BQP9 254 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 SENP2Q9HC62 589 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 KIAA1468Q9P260 1216 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 CLIP2Q9UDT6 1046 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCFD2-201ENST00000388940 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
SCFD2-201ENST00000388940 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
SCFD2-201ENST00000388940 BECN2A8MW95 431 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 U2AF2P26368 475 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCFD2-201ENST00000388940 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 ARMT1Q9H993 441 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 PPP6R2O75170 966 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
SCFD2-201ENST00000388940 BCAMP50895 628 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 NFXL1Q6ZNB6 911 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
SCFD2-201ENST00000388940 TIGD1Q96MW7 591 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
SCFD2-201ENST00000388940 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 SNAP23O00161 211 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
SCFD2-201ENST00000388940 CTDSPL2Q05D32 466 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 CHRNDQ07001 517 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 MICU3Q86XE3 530 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
SCFD2-201ENST00000388940 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
SCFD2-201ENST00000388940 FAM177BA6PVY3 158 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.37
SCFD2-201ENST00000388940 ZNF202O95125 648 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 BARGINQ6ZT62 677 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 JMYQ8N9B5 988 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 ZNF652Q9Y2D9 606 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.37
SCFD2-201ENST00000388940 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 RANBP6O60518 1105 aaKnown RBP17.33■□□□□ 0.36
SCFD2-201ENST00000388940 NEMFO60524 1076 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 IFNAR1P17181 557 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms