RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 STK32BQ9NY57 414 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 SGMS1Q86VZ5 419 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 CELF1Q92879 486 aaKnown RBP27.04■■□□□ 1.92
VPS16-201ENST00000380443 RNF41Q9H4P4 317 aaPredicted RBP27.04■■□□□ 1.92
VPS16-201ENST00000380443 DDX19AQ9NUU7 478 aaKnown RBP27.04■■□□□ 1.92
VPS16-201ENST00000380443 AKNAD1Q5T1N1 836 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 FAM173BQ6P4H8 233 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 STAG1Q8WVM7 1258 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 TFIP11Q9UBB9 837 aaKnown RBP27.04■■□□□ 1.92
VPS16-201ENST00000380443 RCOR1Q9UKL0 485 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 SLC4A4Q9Y6R1 1079 aa27.04■■□□□ 1.92
VPS16-201ENST00000380443 FDPSP14324 419 aaKnown RBP27.03■■□□□ 1.92
VPS16-201ENST00000380443 RFC4P35249 363 aa27.03■■□□□ 1.92
VPS16-201ENST00000380443 FAM84BQ96KN1 310 aaPredicted RBP27.03■■□□□ 1.92
VPS16-201ENST00000380443 C4BP0C0L5 1744 aa27.03■■□□□ 1.92
VPS16-201ENST00000380443 CYP7A1P22680 504 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 GPHNQ9NQX3 736 aaPredicted RBP27.02■■□□□ 1.92
VPS16-201ENST00000380443 GYG1P46976 350 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 TDO2P48775 406 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 MFSD6Q6ZSS7 791 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 CYB5R4Q7L1T6 521 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 IGDCC4Q8TDY8 1250 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 COL4A1P02462 1669 aa27.02■■□□□ 1.92
VPS16-201ENST00000380443 R3HDM1Q15032 1099 aaKnown RBP27.01■■□□□ 1.91
VPS16-201ENST00000380443 SLC15A2Q16348 729 aa27.01■■□□□ 1.91
VPS16-201ENST00000380443 LCORLQ8N3X6 602 aa27.01■■□□□ 1.91
VPS16-201ENST00000380443 ANO8Q9HCE9 1232 aaPredicted RBP27.01■■□□□ 1.91
VPS16-201ENST00000380443 RAI14Q9P0K7 980 aa27.01■■□□□ 1.91
VPS16-201ENST00000380443 ORC3Q9UBD5 711 aaPredicted RBP27.01■■□□□ 1.91
VPS16-201ENST00000380443 MYH15Q9Y2K3 1946 aa27■■□□□ 1.91
VPS16-201ENST00000380443 B4E1Z4 1266 aa27■■□□□ 1.91
VPS16-201ENST00000380443 ADD1P35611 737 aaKnown RBP27■■□□□ 1.91
VPS16-201ENST00000380443 TMTC2Q8N394 836 aa27■■□□□ 1.91
VPS16-201ENST00000380443 C8orf76Q96K31 380 aa27■■□□□ 1.91
VPS16-201ENST00000380443 NUP62CLQ9H1M0 184 aa27■■□□□ 1.91
VPS16-201ENST00000380443 ANAPC4Q9UJX5 808 aa27■■□□□ 1.91
VPS16-201ENST00000380443 MAGEB6P1A0A0J9YX57 407 aa27■■□□□ 1.91
VPS16-201ENST00000380443 METAP2P50579 478 aaKnown RBP eCLIP27■■□□□ 1.91
VPS16-201ENST00000380443 SART3Q15020 963 aaKnown RBP27■■□□□ 1.91
VPS16-201ENST00000380443 GIMAP6Q6P9H5 292 aa27■■□□□ 1.91
VPS16-201ENST00000380443 FUCA2Q9BTY2 467 aa27■■□□□ 1.91
VPS16-201ENST00000380443 RCAN1P53805 252 aa26.99■■□□□ 1.91
VPS16-201ENST00000380443 APOA5Q6Q788 366 aa26.99■■□□□ 1.91
VPS16-201ENST00000380443 BRAPQ7Z569 592 aa26.99■■□□□ 1.91
VPS16-201ENST00000380443 FBXO18Q8NFZ0 1043 aa26.99■■□□□ 1.91
VPS16-201ENST00000380443 CHD4Q14839 1912 aa26.99■■□□□ 1.91
VPS16-201ENST00000380443 NEDD4P46934 1319 aa26.98■■□□□ 1.91
VPS16-201ENST00000380443 NID2Q14112 1375 aa26.98■■□□□ 1.91
VPS16-201ENST00000380443 PSDA5PKW4 1024 aaPredicted RBP26.98■■□□□ 1.91
VPS16-201ENST00000380443 TMEM67Q5HYA8 995 aa26.98■■□□□ 1.91
VPS16-201ENST00000380443 ABCF2Q9UG63 623 aa26.98■■□□□ 1.91
VPS16-201ENST00000380443 ZBTB43O43298 467 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 CCDC192P0DO97 292 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 PCP11498 1178 aaKnown RBP26.97■■□□□ 1.91
VPS16-201ENST00000380443 TM4SF1P30408 202 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 MAP3K11Q16584 847 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 LY9Q9HBG7 655 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 ESPNB1AK53 854 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 HIBADHP31937 336 aaKnown RBP26.97■■□□□ 1.91
VPS16-201ENST00000380443 SYNE3Q6ZMZ3 975 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 ZSWIM5Q9P217 1185 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 C4AP0C0L4 1744 aa26.97■■□□□ 1.91
VPS16-201ENST00000380443 AKT1S1Q96B36 256 aa26.96■■□□□ 1.91
VPS16-201ENST00000380443 PGBD1Q96JS3 809 aa26.96■■□□□ 1.91
VPS16-201ENST00000380443 BRIP1Q9BX63 1249 aa26.96■■□□□ 1.91
VPS16-201ENST00000380443 IFIT3O14879 490 aaKnown RBP26.95■■□□□ 1.91
VPS16-201ENST00000380443 PRKAB2O43741 272 aa26.95■■□□□ 1.91
VPS16-201ENST00000380443 LIG1P18858 919 aa26.95■■□□□ 1.91
VPS16-201ENST00000380443 NFXL1Q6ZNB6 911 aa26.95■■□□□ 1.91
VPS16-201ENST00000380443 RBM43Q6ZSC3 357 aaKnown RBP26.95■■□□□ 1.91
VPS16-201ENST00000380443 RTN4Q9NQC3 1192 aaKnown RBP26.95■■□□□ 1.91
VPS16-201ENST00000380443 CCDC69A6NI79 296 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 CTDSPL2Q05D32 466 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 ZNF827Q17R98 1081 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 RNF214Q8ND24 703 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 BICD2Q8TD16 824 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 RIOK1Q9BRS2 568 aaKnown RBP26.95■■□□□ 1.9
VPS16-201ENST00000380443 CLSTN2Q9H4D0 955 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 RTEL1Q9NZ71 1219 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 TFCP2L1Q9NZI6 479 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 LEMD3Q9Y2U8 911 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 COL1A1P02452 1464 aaPredicted RBP26.95■■□□□ 1.9
VPS16-201ENST00000380443 TAF1P21675 1872 aa26.95■■□□□ 1.9
VPS16-201ENST00000380443 STK36Q9NRP7 1315 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 CACNA1SQ13698 1873 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 ERICH2A1L162 156 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 NPHP1O15259 732 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 KDM4AO75164 1064 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 MIGA1Q8NAN2 632 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 IQSEC3Q9UPP2 1182 aaPredicted RBP26.94■■□□□ 1.9
VPS16-201ENST00000380443 SLC12A7Q9Y666 1083 aa26.94■■□□□ 1.9
VPS16-201ENST00000380443 CLCN1P35523 988 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 PPARAQ07869 468 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 SPTY2D1Q68D10 685 aaPredicted RBP26.93■■□□□ 1.9
VPS16-201ENST00000380443 TNMDQ9H2S6 317 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 RRAGDQ9NQL2 400 aaPredicted RBP26.93■■□□□ 1.9
VPS16-201ENST00000380443 DACT1Q9NYF0 836 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 CTAGE5O15320 804 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 GRAPQ13588 217 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms