RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 CPLX1O14810 134 aa29.26■■■□□ 2.27
NDEL1-202ENST00000380025 TRAPPC3LQ5T215 181 aa29.26■■■□□ 2.27
NDEL1-202ENST00000380025 FAM196AQ6ZSG2 479 aa29.26■■■□□ 2.27
NDEL1-202ENST00000380025 ILDR1Q86SU0 546 aaPredicted RBP29.26■■■□□ 2.27
NDEL1-202ENST00000380025 TRPC5Q9UL62 973 aaPredicted RBP29.26■■■□□ 2.27
NDEL1-202ENST00000380025 MYH13Q9UKX3 1938 aa29.26■■■□□ 2.27
NDEL1-202ENST00000380025 APOA5Q6Q788 366 aa29.25■■■□□ 2.27
NDEL1-202ENST00000380025 LY9Q9HBG7 655 aa29.25■■■□□ 2.27
NDEL1-202ENST00000380025 ORC3Q9UBD5 711 aaPredicted RBP29.25■■■□□ 2.27
NDEL1-202ENST00000380025 CNNM2Q9H8M5 875 aa29.25■■■□□ 2.27
NDEL1-202ENST00000380025 LRRC4BQ9NT99 713 aa29.25■■■□□ 2.27
NDEL1-202ENST00000380025 ZSWIM5Q9P217 1185 aa29.25■■■□□ 2.27
NDEL1-202ENST00000380025 STAG1Q8WVM7 1258 aa29.24■■■□□ 2.27
NDEL1-202ENST00000380025 ANKRD2Q9GZV1 360 aa29.24■■■□□ 2.27
NDEL1-202ENST00000380025 KDM4AO75164 1064 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 SGMS1Q86VZ5 419 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 BCL11BQ9C0K0 894 aaPredicted RBP29.23■■■□□ 2.27
NDEL1-202ENST00000380025 METAP2P50579 478 aaKnown RBP eCLIP29.23■■■□□ 2.27
NDEL1-202ENST00000380025 ATL3Q6DD88 541 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 MFSD6Q6ZSS7 791 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 C8orf76Q96K31 380 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 KRT23Q9C075 422 aa29.23■■■□□ 2.27
NDEL1-202ENST00000380025 FTOQ9C0B1 505 aaKnown RBP eCLIP29.23■■■□□ 2.27
NDEL1-202ENST00000380025 MAGEB6P1A0A0J9YX57 407 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 SEMA3EO15041 775 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 TMEM67Q5HYA8 995 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 RIOK1Q9BRS2 568 aaKnown RBP29.22■■■□□ 2.27
NDEL1-202ENST00000380025 DACT1Q9NYF0 836 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 RCOR1Q9UKL0 485 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 CEBPZQ03701 1054 aaKnown RBP29.22■■■□□ 2.27
NDEL1-202ENST00000380025 OTUD7BQ6GQQ9 843 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 USP28Q96RU2 1077 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 NUP62CLQ9H1M0 184 aa29.22■■■□□ 2.27
NDEL1-202ENST00000380025 ESPNB1AK53 854 aa29.21■■■□□ 2.27
NDEL1-202ENST00000380025 LIFRP42702 1097 aa29.21■■■□□ 2.27
NDEL1-202ENST00000380025 NFIXQ14938 502 aa29.21■■■□□ 2.27
NDEL1-202ENST00000380025 FBXO18Q8NFZ0 1043 aa29.21■■■□□ 2.27
NDEL1-202ENST00000380025 ZNF384Q8TF68 577 aa29.21■■■□□ 2.27
NDEL1-202ENST00000380025 ZNF396Q96N95 335 aaPredicted RBP29.21■■■□□ 2.27
NDEL1-202ENST00000380025 RXRAP19793 462 aa29.2■■■□□ 2.27
NDEL1-202ENST00000380025 SDR42E1Q8WUS8 393 aa29.2■■■□□ 2.27
NDEL1-202ENST00000380025 UBR3Q6ZT12 1888 aa29.2■■■□□ 2.27
NDEL1-202ENST00000380025 CDC27P30260 824 aa29.2■■■□□ 2.26
NDEL1-202ENST00000380025 BICD2Q8TD16 824 aa29.2■■■□□ 2.26
NDEL1-202ENST00000380025 PDS5AQ29RF7 1337 aaKnown RBP29.2■■■□□ 2.26
NDEL1-202ENST00000380025 ECM29Q5VYK3 1845 aa29.2■■■□□ 2.26
NDEL1-202ENST00000380025 UVSSAQ2YD98 709 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 MICU3Q86XE3 530 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 DDX19AQ9NUU7 478 aaKnown RBP29.19■■■□□ 2.26
NDEL1-202ENST00000380025 TFCP2L1Q9NZI6 479 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 IFIT3O14879 490 aaKnown RBP29.19■■■□□ 2.26
NDEL1-202ENST00000380025 NPHP1O15259 732 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 ZBTB43O43298 467 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 NFXL1Q6ZNB6 911 aa29.19■■■□□ 2.26
NDEL1-202ENST00000380025 HIBADHP31937 336 aaKnown RBP29.18■■■□□ 2.26
NDEL1-202ENST00000380025 PPARAQ07869 468 aa29.18■■■□□ 2.26
NDEL1-202ENST00000380025 NR1I2O75469 434 aa29.18■■■□□ 2.26
NDEL1-202ENST00000380025 MAP3K11Q16584 847 aa29.18■■■□□ 2.26
NDEL1-202ENST00000380025 GJB4Q9NTQ9 266 aa29.18■■■□□ 2.26
NDEL1-202ENST00000380025 ADRA2BP18089 450 aa29.17■■■□□ 2.26
NDEL1-202ENST00000380025 CAMK4Q16566 473 aa29.17■■■□□ 2.26
NDEL1-202ENST00000380025 RRP12Q5JTH9 1297 aaKnown RBP29.17■■■□□ 2.26
NDEL1-202ENST00000380025 FAM217BQ9NTX9 383 aaPredicted RBP29.17■■■□□ 2.26
NDEL1-202ENST00000380025 IRS2Q9Y4H2 1338 aa29.17■■■□□ 2.26
NDEL1-202ENST00000380025 CDKL5O76039 1030 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 DYNLL1P63167 89 aaKnown RBP29.16■■■□□ 2.26
NDEL1-202ENST00000380025 RGS22Q8NE09 1264 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 MYL10Q9BUA6 226 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 CLSTN2Q9H4D0 955 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 NTRK3Q16288 839 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 CCDC144CPQ8IYA2 1237 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 RNF41Q9H4P4 317 aaPredicted RBP29.16■■■□□ 2.26
NDEL1-202ENST00000380025 ANAPC4Q9UJX5 808 aa29.16■■■□□ 2.26
NDEL1-202ENST00000380025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.15■■■□□ 2.26
NDEL1-202ENST00000380025 GOLGA8AA7E2F4 631 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 CNBD1Q8NA66 436 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 NSUN4Q96CB9 384 aaKnown RBP29.15■■■□□ 2.26
NDEL1-202ENST00000380025 TNMDQ9H2S6 317 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 TOMM22Q9NS69 142 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 BAZ2AQ9UIF9 1905 aaKnown RBP29.15■■■□□ 2.26
NDEL1-202ENST00000380025 MAST2Q6P0Q8 1798 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 NID2Q14112 1375 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 CCDC192P0DO97 292 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 RBM43Q6ZSC3 357 aaKnown RBP29.15■■■□□ 2.26
NDEL1-202ENST00000380025 TXNRD3Q86VQ6 643 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 SLC12A7Q9Y666 1083 aa29.15■■■□□ 2.26
NDEL1-202ENST00000380025 CCDC69A6NI79 296 aa29.14■■■□□ 2.26
NDEL1-202ENST00000380025 HS1BP3Q53T59 392 aa29.14■■■□□ 2.26
NDEL1-202ENST00000380025 CPLX2Q6PUV4 134 aaKnown RBP29.14■■■□□ 2.26
NDEL1-202ENST00000380025 STK11IPQ8N1F8 1099 aa29.14■■■□□ 2.26
NDEL1-202ENST00000380025 CLCN1P35523 988 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 GRAPQ13588 217 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 GRAPLQ8TC17 118 aaPredicted RBP29.13■■■□□ 2.25
NDEL1-202ENST00000380025 PHKBQ93100 1093 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 AIFM3Q96NN9 605 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 MTA3Q9BTC8 594 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 MINDY4BA8MYZ0 360 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 MECOMQ03112 1051 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 BRAPQ7Z569 592 aa29.13■■■□□ 2.25
NDEL1-202ENST00000380025 SLC51AQ86UW1 340 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms