RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CCER2I3L3R5 266 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 GPR25O00155 361 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 SHROOM1Q2M3G4 852 aaPredicted RBP5.8□□□□□ -1.48
C9orf72-203ENST00000380003 LDLRAD1Q5T700 205 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 FAM43AQ8N2R8 423 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.8□□□□□ -1.48
C9orf72-203ENST00000380003 ZNF384Q8TF68 577 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 LPIN2Q92539 896 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 XAGE2Q96GT9 111 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 DAGLAQ9Y4D2 1042 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 FAM205AQ6ZU69 1335 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 SLC5A1P13866 664 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 SLFNL1Q499Z3 407 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 CDC42EP5Q6NZY7 148 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 CCDC8Q9H0W5 538 aaPredicted RBP5.8□□□□□ -1.48
C9orf72-203ENST00000380003 SERPINA10Q9UK55 444 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 EXOC6BQ9Y2D4 811 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 TRIM17Q9Y577 477 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 CHGBP05060 677 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 OS9Q13438 667 aaPredicted RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 GORABQ5T7V8 394 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 C20orf194Q5TEA3 1177 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 C15orf52Q6ZUT6 534 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 IFNL1Q8IU54 200 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 CD99L2Q8TCZ2 262 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 WNK4Q96J92 1243 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 API5Q9BZZ5 524 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 IL1RAPL2Q9NP60 686 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 DDX4Q9NQI0 724 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 USP40Q9NVE5 1235 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 CACNA1FO60840 1977 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 SURF6O75683 361 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 LDHBP07195 334 aaKnown RBP5.79□□□□□ -1.48
C9orf72-203ENST00000380003 SUPT20HL1Q3ZLR7 823 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 AK9Q5TCS8 1911 aa5.79□□□□□ -1.48
C9orf72-203ENST00000380003 CCL15-CCL14A0A0B4J2E2 113 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 DDTLA6NHG4 134 aaPredicted RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 CCL15Q16663 113 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 ANKRD13AQ8IZ07 590 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 BRI3BPQ8WY22 251 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 DBNDD2Q9BQY9 259 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 FAM198AQ9UFP1 575 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 HPS5Q9UPZ3 1129 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 COG6Q9Y2V7 657 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 PSME4Q14997 1843 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 A0A1B0GUL6 1792 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 CA12O43570 354 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 CYP2C8P10632 490 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 MCAMP43121 646 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 IREB2P48200 963 aaKnown RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 MECOMQ03112 1051 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 EVX2Q03828 476 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 INTS3Q68E01 1043 aaKnown RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 SH3BP5LQ7L8J4 393 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 ADGRA1Q86SQ6 560 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 DZIP1Q86YF9 867 aaKnown RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 MS4A4AQ96JQ5 239 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 HMG20BQ9P0W2 317 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 POTEFA5A3E0 1075 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 GNAI2P04899 355 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 IL15P40933 162 aaPredicted RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 TM4SF4P48230 202 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 RGS3P49796 1198 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 CLCN6P51797 869 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 FKBP1BP68106 108 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 MLLT1Q03111 559 aaPredicted RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 ZKSCAN2Q63HK3 967 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 MTMR14Q8NCE2 650 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 EDC3Q96F86 508 aaKnown RBP5.78□□□□□ -1.48
C9orf72-203ENST00000380003 ZDHHC15Q96MV8 337 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 RAI14Q9P0K7 980 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 CPA4Q9UI42 421 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 SNCAIPQ9Y6H5 919 aa5.78□□□□□ -1.48
C9orf72-203ENST00000380003 AKAP11Q9UKA4 1901 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 TRIM75PA6NK02 468 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 TNFAIP1Q13829 316 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 LHX8Q68G74 356 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 MIGA1Q8NAN2 632 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 SH3TC2Q8TF17 1288 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 ANTXR1Q9H6X2 564 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 COPRSQ9NQ92 184 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 CSADQ9Y600 493 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 KIF16BQ96L93 1317 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 SPTBN5Q9NRC6 3674 aaKnown RBP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 BTDP43251 543 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 MAP3K9P80192 1104 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 G3BP1Q13283 466 aaKnown RBP eCLIP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 TAF1CQ15572 869 aaPredicted RBP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 CTU1Q7Z7A3 348 aaKnown RBP5.77□□□□□ -1.49
C9orf72-203ENST00000380003 TMOD2Q9NZR1 351 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 TAOK2Q9UL54 1235 aa5.77□□□□□ -1.49
C9orf72-203ENST00000380003 PAPPA2Q9BXP8 1791 aa5.76□□□□□ -1.49
C9orf72-203ENST00000380003 TRIOBPQ9H2D6 2365 aa5.76□□□□□ -1.49
C9orf72-203ENST00000380003 BTBD19C9JJ37 291 aa5.76□□□□□ -1.49
C9orf72-203ENST00000380003 CTGFP29279 349 aa5.76□□□□□ -1.49
C9orf72-203ENST00000380003 SREBF2Q12772 1141 aa5.76□□□□□ -1.49
C9orf72-203ENST00000380003 OTOP1Q7RTM1 612 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms