RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TRDNQ13061 729 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 CYB5R4Q7L1T6 521 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 BAZ2AQ9UIF9 1905 aaKnown RBP20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 STX6O43752 255 aa20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 TMED8Q6PL24 325 aaPredicted RBP20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 C2CD5Q86YS7 1000 aa20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 B4E1Z4 1266 aa20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 DZIP1Q86YF9 867 aaKnown RBP20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 AATFQ9NY61 560 aaKnown RBP eCLIP20.49■□□□□ 0.87
THUMPD2-201ENST00000378727 LDHBP07195 334 aaKnown RBP20.48■□□□□ 0.87
THUMPD2-201ENST00000378727 AKNAD1Q5T1N1 836 aa20.48■□□□□ 0.87
THUMPD2-201ENST00000378727 MCTP1Q6DN14 999 aa20.48■□□□□ 0.87
THUMPD2-201ENST00000378727 ZNF274Q96GC6 653 aaPredicted RBP20.48■□□□□ 0.87
THUMPD2-201ENST00000378727 TRAK2O60296 914 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 ZNF622Q969S3 477 aaKnown RBP eCLIP20.47■□□□□ 0.873e-9■■□□□ 12.8
THUMPD2-201ENST00000378727 BRPF3Q9ULD4 1205 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 JAK2O60674 1132 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 IGSF3O75054 1194 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 ZSCAN22P10073 491 aaPredicted RBP20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 MPNDQ8N594 471 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 MTMR6Q9Y217 621 aa20.47■□□□□ 0.87
THUMPD2-201ENST00000378727 SMIM22K7EJ46 135 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 PPARAQ07869 468 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 STYK1Q6J9G0 422 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 H0YIN7 160 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 GOLGA6L22H0YM25 854 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 CCT2P78371 535 aaKnown RBP20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 ANAPC4Q9UJX5 808 aa20.46■□□□□ 0.87
THUMPD2-201ENST00000378727 MYH2Q9UKX2 1941 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 CHRNA5P30532 468 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 GIMAP6Q6P9H5 292 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 NCOA5Q9HCD5 579 aaKnown RBP20.45■□□□□ 0.86
THUMPD2-201ENST00000378727 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 DIXDC1Q155Q3 683 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 LLPHQ9BRT6 129 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 ZSWIM5Q9P217 1185 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 HPS5Q9UPZ3 1129 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 KLF18A0A0U1RQI7 1052 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 KDM4AO75164 1064 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 PTMSP20962 102 aa20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 CRNKL1Q9BZJ0 848 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 ANGEL1Q9UNK9 670 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-201ENST00000378727 CYP2D7A0A087X1C5 515 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 F13A1P00488 732 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 CTR9Q6PD62 1173 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 IGDCC4Q8TDY8 1250 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 KRT23Q9C075 422 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 COA1Q9GZY4 146 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 SENP2Q9HC62 589 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 DCP1AQ9NPI6 582 aaPredicted RBP20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 TCHHQ07283 1943 aa20.43■□□□□ 0.86
THUMPD2-201ENST00000378727 STK11IPQ8N1F8 1099 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 TMEM87BQ96K49 555 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 PDCP20941 246 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 GSTO1P78417 241 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 MFSD14BQ5SR56 506 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 DDX11Q96FC9 970 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 ZC3H12CQ9C0D7 883 aaKnown RBP20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 LAMB1P07942 1786 aa20.42■□□□□ 0.86
THUMPD2-201ENST00000378727 VPS37CA5D8V6 355 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 GSE1Q14687 1217 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 FOXD4L6Q3SYB3 417 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 FOXD4L3Q6VB84 417 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 RNF41Q9H4P4 317 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 GOLGA8BA8MQT2 603 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 USP17L12C9JPN9 530 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 USP17L21D6R901 530 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 EVX2Q03828 476 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 RRP12Q5JTH9 1297 aaKnown RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 RTFDC1Q9BY42 306 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 LY9Q9HBG7 655 aa20.41■□□□□ 0.86
THUMPD2-201ENST00000378727 MROH7-TTC4A0A0A0MT08 1334 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 PTPDC1A2A3K4 754 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 PPP4CP60510 307 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 GTF2IP78347 998 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 RAB11FIP4Q86YS3 637 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 SH3RF3Q8TEJ3 882 aaPredicted RBP20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 TBC1D22AQ8WUA7 517 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
THUMPD2-201ENST00000378727 PRPF40AO75400 957 aaKnown RBP20.39■□□□□ 0.86
THUMPD2-201ENST00000378727 PDIA4P13667 645 aaKnown RBP20.39■□□□□ 0.86
THUMPD2-201ENST00000378727 MKRN1Q9UHC7 482 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms