RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CSADQ9Y600 493 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 KCNG4Q8TDN1 519 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 ATRIPQ8WXE1 791 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 ABCC11Q96J66 1382 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.13
TRIM13-202ENST00000378182 HSPA1LP34931 641 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 KIF5AQ12840 1032 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 NSMFQ6X4W1 530 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 VPS52Q8N1B4 723 aa15.83■□□□□ 0.13
TRIM13-202ENST00000378182 INF2Q27J81 1249 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 DPY19L2Q6NUT2 758 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 CTAGE9A4FU28 777 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 CACYBPQ9HB71 228 aaKnown RBP15.83■□□□□ 0.12
TRIM13-202ENST00000378182 IRAK4Q9NWZ3 460 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-202ENST00000378182 TSTA3Q13630 321 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-202ENST00000378182 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 SEL1L2Q5TEA6 688 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 SV2BQ7L1I2 683 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 TTC6Q86TZ1 520 aa15.83■□□□□ 0.12
TRIM13-202ENST00000378182 FAM193BQ96PV7 902 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-202ENST00000378182 FANCAO15360 1455 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 RNF113AO15541 343 aaKnown RBP15.82■□□□□ 0.12
TRIM13-202ENST00000378182 SDSP20132 328 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 PSMD6Q15008 389 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 ARHGEF35A5YM69 484 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 ITKQ08881 620 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 TRAF5O00463 557 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
TRIM13-202ENST00000378182 ITIH3Q06033 890 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 LZTFL1Q9NQ48 299 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 CFBP00751 764 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 ITGA6P23229 1130 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 DNM2P50570 870 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 RPUSD2Q8IZ73 545 aaKnown RBP15.82■□□□□ 0.12
TRIM13-202ENST00000378182 DENND2AQ9ULE3 1009 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 DIXDC1Q155Q3 683 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 TTC30BQ8N4P2 665 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 SPOPO43791 374 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 BMP15O95972 392 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 NBPF3Q9H094 633 aa15.82■□□□□ 0.12
TRIM13-202ENST00000378182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 GIPC1O14908 333 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 TXKP42681 527 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 MKRN1Q9UHC7 482 aaKnown RBP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 BSPRYQ5W0U4 402 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 JAKMIP2Q96AA8 810 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 OATP04181 439 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 CARD10Q9BWT7 1032 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 B4E1Z4 1266 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 TRPC6Q9Y210 931 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 SYT1P21579 422 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 RSPH3Q86UC2 560 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
TRIM13-202ENST00000378182 NOC2LQ9Y3T9 749 aaKnown RBP15.81■□□□□ 0.12
TRIM13-202ENST00000378182 STK10O94804 968 aaKnown RBP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 IGBP1P78318 339 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 Q3C1V9 767 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 ZSCAN30Q86W11 494 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 KIF9Q9HAQ2 790 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 DNM1Q05193 864 aaKnown RBP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 PIK3AP1Q6ZUJ8 805 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 ARHGEF16Q5VV41 709 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 MAN1A1P33908 653 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 HSPA4P34932 840 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 DCPSQ96C86 337 aaKnown RBP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 NOL3O60936 208 aaKnown RBP15.8■□□□□ 0.12
TRIM13-202ENST00000378182 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 NCAPG2Q86XI2 1143 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 GLG1Q92896 1179 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 PLCH2O75038 1416 aa15.8■□□□□ 0.12
TRIM13-202ENST00000378182 HGSO14964 777 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-202ENST00000378182 GCNT3O95395 438 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 NAA25Q14CX7 972 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
TRIM13-202ENST00000378182 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 SKA2Q8WVK7 121 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms