RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TOP1P11387 765 aaKnown RBP20.75■□□□□ 0.91
GNE-201ENST00000377902 CCDC57Q2TAC2 916 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 VSTM4Q8IW00 320 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 APPBP2Q92624 585 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 MAP3K14Q99558 947 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 VWA3AA6NCI4 1184 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 METAP2P50579 478 aaKnown RBP eCLIP20.75■□□□□ 0.91
GNE-201ENST00000377902 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.75■□□□□ 0.911e-6■■■■□ 22.3
GNE-201ENST00000377902 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
GNE-201ENST00000377902 POLR3GO15318 223 aaPredicted RBP20.74■□□□□ 0.91
GNE-201ENST00000377902 CIAO1O76071 339 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 TMEM139Q8IV31 216 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 WDR24Q96S15 920 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 PHLPP2Q6ZVD8 1323 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 APPP05067 770 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 PDILTQ8N807 584 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
GNE-201ENST00000377902 B4E1Z4 1266 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 ZRANB2O95218 330 aaKnown RBP eCLIP20.73■□□□□ 0.91
GNE-201ENST00000377902 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
GNE-201ENST00000377902 GRIN1Q05586 938 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 CCDC191Q8NCU4 936 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 TRPM3Q9HCF6 1732 aaPredicted RBP20.73■□□□□ 0.91
GNE-201ENST00000377902 TADA3O75528 432 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 CNNM3Q8NE01 707 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 TIGD1Q96MW7 591 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 ANGEL1Q9UNK9 670 aaKnown RBP20.73■□□□□ 0.91
GNE-201ENST00000377902 PPP2R2CQ9Y2T4 447 aa20.73■□□□□ 0.91
GNE-201ENST00000377902 RANBP6O60518 1105 aaKnown RBP20.72■□□□□ 0.91
GNE-201ENST00000377902 RESP18Q5W5W9 173 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.72■□□□□ 0.91
GNE-201ENST00000377902 ZBTB9Q96C00 473 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
GNE-201ENST00000377902 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 ZMYM6O95789 1325 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 MCAMP43121 646 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 TMCO3Q6UWJ1 677 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 TOGARAM2Q6ZUX3 1019 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 TRMT44Q8IYL2 757 aaKnown RBP20.72■□□□□ 0.91
GNE-201ENST00000377902 KCNH3Q9ULD8 1083 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 GLI3P10071 1580 aa20.72■□□□□ 0.91
GNE-201ENST00000377902 TJP1Q07157 1748 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 ZFYP08048 801 aaPredicted RBP20.71■□□□□ 0.91
GNE-201ENST00000377902 APOA5Q6Q788 366 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 GRAMD1CQ8IYS0 662 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 CPDO75976 1380 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 PPP6R2O75170 966 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 SASH3O75995 380 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 C4BP0C0L5 1744 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 FMR1Q06787 632 aaKnown RBP eCLIP20.71■□□□□ 0.91
GNE-201ENST00000377902 TRDNQ13061 729 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 SLC9C2Q5TAH2 1124 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 OLFM4Q6UX06 510 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 KRBA2Q6ZNG9 492 aa20.71■□□□□ 0.91
GNE-201ENST00000377902 CBFA2T2O43439 604 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 GNG11P61952 73 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 TAF7LQ5H9L4 462 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 DESI2Q9BSY9 194 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
GNE-201ENST00000377902 PRR29P0C7W0 189 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 TAF3Q5VWG9 929 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
GNE-201ENST00000377902 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 PROSER2Q86WR7 435 aaPredicted RBP20.69■□□□□ 0.9
GNE-201ENST00000377902 TRERF1Q96PN7 1200 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.69■□□□□ 0.9
GNE-201ENST00000377902 FAM217BQ9NTX9 383 aaPredicted RBP20.69■□□□□ 0.9
GNE-201ENST00000377902 GUCY1A2P33402 732 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 LRRFIP1Q32MZ4 808 aaKnown RBP20.69■□□□□ 0.9
GNE-201ENST00000377902 NFXL1Q6ZNB6 911 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 CCDC82Q8N4S0 544 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 BAG1Q99933 345 aaPredicted RBP20.69■□□□□ 0.9
GNE-201ENST00000377902 IRX2Q9BZI1 471 aaPredicted RBP20.69■□□□□ 0.9
GNE-201ENST00000377902 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
GNE-201ENST00000377902 UBN2Q6ZU65 1347 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 IDH1O75874 414 aaKnown RBP20.68■□□□□ 0.9
GNE-201ENST00000377902 CYP2C19P33261 490 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 NTRK3Q16288 839 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 TICAM2Q86XR7 235 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 CCP110O43303 1012 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
GNE-201ENST00000377902 MTF1Q14872 753 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 CMTR1Q8N1G2 835 aaKnown RBP20.68■□□□□ 0.9
GNE-201ENST00000377902 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 SLC26A6Q9BXS9 759 aa20.68■□□□□ 0.9
GNE-201ENST00000377902 PIH1D3Q9NQM4 214 aaKnown RBP20.68■□□□□ 0.9
GNE-201ENST00000377902 KIF1AQ12756 1690 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 CCDC66A2RUB6 948 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 EFCAB8A8MWE9 144 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 BTBD18B2RXH4 712 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 TUBB4AP04350 444 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 MDM2Q00987 491 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms