RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 HSP90B1P14625 803 aaKnown RBP11.23□□□□□ -0.61
TRIM39-202ENST00000376659 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
TRIM39-202ENST00000376659 MYRIPQ8NFW9 859 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 MORC2Q9Y6X9 1032 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-202ENST00000376659 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 RGL2O15211 777 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 NDUFA8P51970 172 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 NCAPHQ15003 741 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 SNAP23O00161 211 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 FGRP09769 529 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 OTUD7BQ6GQQ9 843 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 INCENPQ9NQS7 918 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 CCDC87Q9NVE4 849 aa11.23□□□□□ -0.61
TRIM39-202ENST00000376659 SLC9C2Q5TAH2 1124 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
TRIM39-202ENST00000376659 GOLGA8BA8MQT2 603 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 CAVIN2O95810 425 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 LIFRP42702 1097 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 BRAPQ7Z569 592 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 A0A087WWV3 80 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-202ENST00000376659 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
TRIM39-202ENST00000376659 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
TRIM39-202ENST00000376659 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
TRIM39-202ENST00000376659 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.61
TRIM39-202ENST00000376659 FUT2Q10981 343 aa11.21□□□□□ -0.61
TRIM39-202ENST00000376659 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
TRIM39-202ENST00000376659 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
TRIM39-202ENST00000376659 SIPA1L1O43166 1804 aa11.21□□□□□ -0.61
TRIM39-202ENST00000376659 CTAGE5O15320 804 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 PPFIA3O75145 1194 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 PTGS1P23219 599 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 SEC23AQ15436 765 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 LRRFIP1Q32MZ4 808 aaKnown RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 LCORLQ8N3X6 602 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 TUBE1Q9UJT0 475 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 ZNF213O14771 459 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 CCZ1BP86790 482 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 CCZ1P86791 482 aaPredicted RBP11.21□□□□□ -0.62
TRIM39-202ENST00000376659 SHC4Q6S5L8 630 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 IFNL3Q8IZI9 196 aa11.21□□□□□ -0.62
TRIM39-202ENST00000376659 BRWD3Q6RI45 1802 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 PDS5AQ29RF7 1337 aaKnown RBP11.2□□□□□ -0.62
TRIM39-202ENST00000376659 H3BQV1 296 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-202ENST00000376659 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 STX1AQ16623 288 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 MTA3Q9BTC8 594 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM39-202ENST00000376659 NAP1L2Q9ULW6 460 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-202ENST00000376659 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 DYNC1I1O14576 645 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 SIK1P57059 783 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 MPNDQ8N594 471 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 TMEM87BQ96K49 555 aa11.2□□□□□ -0.62
TRIM39-202ENST00000376659 COL11A2P13942 1736 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-202ENST00000376659 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 UQCRHP07919 91 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 RCAN1P53805 252 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 LRMPQ12912 555 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 SLC39A14Q15043 492 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 EXOC5O00471 708 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 PPP6R2O75170 966 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 ZNF165P49910 485 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 RESP18Q5W5W9 173 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 ELOA2Q8IYF1 753 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 CACTINQ8WUQ7 758 aaKnown RBP11.19□□□□□ -0.62
TRIM39-202ENST00000376659 B4E1Z4 1266 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 PRKAB2O43741 272 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 NPY5RQ15761 445 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
TRIM39-202ENST00000376659 PRIMPOLQ96LW4 560 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms