RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 DDX19AQ9NUU7 478 aaKnown RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 CPLX1O14810 134 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 PRKAB2O43741 272 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
MSH5-202ENST00000375740 NAPBQ9H115 298 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 UBAP1LF5GYI3 381 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
MSH5-202ENST00000375740 TAF1P21675 1872 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 NEDD4P46934 1319 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 ANKRD7Q92527 254 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 CNTNAP4Q9C0A0 1308 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 LRP2BPQ9P2M1 347 aa16.29■□□□□ 0.2
MSH5-202ENST00000375740 ATL3Q6DD88 541 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 LCORLQ8N3X6 602 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 KIAA1524Q8TCG1 905 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
MSH5-202ENST00000375740 KDM4AO75164 1064 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 GYG1P46976 350 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 TACC3Q9Y6A5 838 aa16.28■□□□□ 0.2
MSH5-202ENST00000375740 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
MSH5-202ENST00000375740 SPC24Q8NBT2 197 aa16.27■□□□□ 0.2
MSH5-202ENST00000375740 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
MSH5-202ENST00000375740 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
MSH5-202ENST00000375740 TYRO3Q06418 890 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 TMEM87BQ96K49 555 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.19
MSH5-202ENST00000375740 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.19
MSH5-202ENST00000375740 RXRAP19793 462 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 ZSWIM5Q9P217 1185 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 SRP68Q9UHB9 627 aaKnown RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 VGLL3A8MV65 326 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 METAP2P50579 478 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSH5-202ENST00000375740 PDE4CQ08493 712 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 RBM43Q6ZSC3 357 aaKnown RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 FNBP4Q8N3X1 1017 aaPredicted RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
MSH5-202ENST00000375740 NARFQ9UHQ1 456 aa16.26■□□□□ 0.19
MSH5-202ENST00000375740 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 GNAT2P19087 354 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
MSH5-202ENST00000375740 APOA5Q6Q788 366 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 CYP7A1P22680 504 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 TDO2P48775 406 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 NFXL1Q6ZNB6 911 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
MSH5-202ENST00000375740 NACAP1Q9BZK3 213 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
MSH5-202ENST00000375740 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
MSH5-202ENST00000375740 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
MSH5-202ENST00000375740 CDC27P30260 824 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 ADGRA1Q86SQ6 560 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 USP21Q9UK80 565 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 CASZ1Q86V15 1759 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 SETDB2Q96T68 719 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
MSH5-202ENST00000375740 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
MSH5-202ENST00000375740 RGL2O15211 777 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 GNPATO15228 680 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 ZBTB43O43298 467 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 CTIFO43310 598 aaKnown RBP16.23■□□□□ 0.19
MSH5-202ENST00000375740 ME1P48163 572 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 FAM200AQ8TCP9 573 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 CHD4Q14839 1912 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms