RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-203ENST00000374490 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
HMGCL-203ENST00000374490 MROH5Q6ZUA9 1318 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 GOLGA6L19H0YKK7 550 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 CDKL5O76039 1030 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
HMGCL-203ENST00000374490 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
HMGCL-203ENST00000374490 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
HMGCL-203ENST00000374490 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
HMGCL-203ENST00000374490 GREM2Q9H772 168 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
HMGCL-203ENST00000374490 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 MCAMP43121 646 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ME1P48163 572 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ADALQ6DHV7 355 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 DNAJC25Q9H1X3 360 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 DDX60Q8IY21 1712 aaKnown RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 PDE8BO95263 885 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 FOSBP53539 338 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ANTXR2P58335 489 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 HAND2P61296 217 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 PUM3Q15397 648 aaKnown RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 ALX1Q15699 326 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 SPC24Q8NBT2 197 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 FBXO18Q8NFZ0 1043 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 LPIN2Q92539 896 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
HMGCL-203ENST00000374490 KCNF1Q9H3M0 494 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 TAF1LQ8IZX4 1826 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
HMGCL-203ENST00000374490 MYH7P12883 1935 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 NEMFO60524 1076 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
HMGCL-203ENST00000374490 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
HMGCL-203ENST00000374490 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
HMGCL-203ENST00000374490 STK38Q15208 465 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 DRC7Q8IY82 874 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
HMGCL-203ENST00000374490 COL24A1Q17RW2 1714 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 SLC5A1P13866 664 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 IQCB1Q15051 598 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
HMGCL-203ENST00000374490 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 MRFAP1L1Q96HT8 127 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.19
HMGCL-203ENST00000374490 ARAP2Q8WZ64 1704 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 CHD4Q14839 1912 aa16.21■□□□□ 0.19
HMGCL-203ENST00000374490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
HMGCL-203ENST00000374490 PTGS1P23219 599 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 GUCY1B3Q02153 619 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 MPNDQ8N594 471 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 LINC00301Q8NCQ3 95 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
HMGCL-203ENST00000374490 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
HMGCL-203ENST00000374490 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
HMGCL-203ENST00000374490 BECN2A8MW95 431 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
HMGCL-203ENST00000374490 GNPATO15228 680 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 PDE6AP16499 860 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 FGFR2P21802 821 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 FMR1NBQ8N0W7 255 aaPredicted RBP16.19■□□□□ 0.18
HMGCL-203ENST00000374490 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
HMGCL-203ENST00000374490 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 LAMB2P55268 1798 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 RGL2O15211 777 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 SPTLC2O15270 562 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
HMGCL-203ENST00000374490 FTOQ9C0B1 505 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGCL-203ENST00000374490 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
HMGCL-203ENST00000374490 ZNF532Q9HCE3 1301 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
HMGCL-203ENST00000374490 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms