RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 FAM107BQ9H098 131 aa16.57■□□□□ 0.24
A1CF-202ENST00000373993 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 APBB1O00213 710 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 TUBBP07437 444 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
A1CF-202ENST00000373993 BRD3Q15059 726 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 LEKR1Q6ZMV7 388 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 CEP57L1Q8IYX8 460 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
A1CF-202ENST00000373993 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
A1CF-202ENST00000373993 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 C21orf2O43822 256 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 TBC1D8O95759 1140 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 GPTP24298 496 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 CC2D1AQ6P1N0 951 aaPredicted RBP16.55■□□□□ 0.24
A1CF-202ENST00000373993 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 RABGGTAQ92696 567 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
A1CF-202ENST00000373993 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 HIP1O00291 1037 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
A1CF-202ENST00000373993 TUBB2AQ13885 445 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 TUBB2BQ9BVA1 445 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
A1CF-202ENST00000373993 JRKLQ9Y4A0 524 aa16.55■□□□□ 0.24
A1CF-202ENST00000373993 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 PSEN1P49768 467 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 TTC31Q49AM3 519 aaPredicted RBP16.54■□□□□ 0.24
A1CF-202ENST00000373993 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 REXO1L1PQ8IX06 675 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
A1CF-202ENST00000373993 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
A1CF-202ENST00000373993 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
A1CF-202ENST00000373993 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 ADAM21Q9UKJ8 722 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 MAP2K7O14733 419 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 NR1I2O75469 434 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 ME3Q16798 604 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 CEP89Q96ST8 783 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 TACO1Q9BSH4 297 aaKnown RBP16.53■□□□□ 0.24
A1CF-202ENST00000373993 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 TRMT1Q9NXH9 659 aaKnown RBP16.53■□□□□ 0.24
A1CF-202ENST00000373993 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
A1CF-202ENST00000373993 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.24
A1CF-202ENST00000373993 SRGNP10124 158 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 NECTIN1Q15223 517 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.24
A1CF-202ENST00000373993 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 RCOR1Q9UKL0 485 aa16.52■□□□□ 0.24
A1CF-202ENST00000373993 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
A1CF-202ENST00000373993 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 PDIA6Q15084 440 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
A1CF-202ENST00000373993 CCDC91Q7Z6B0 441 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 TIAM2Q8IVF5 1701 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 LARGE1O95461 756 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 PRELPP51888 382 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 POLA2Q14181 598 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 RSRC2Q7L4I2 434 aaKnown RBP16.51■□□□□ 0.23
A1CF-202ENST00000373993 CNKSR1Q969H4 720 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 FUT8Q9BYC5 575 aa16.51■□□□□ 0.23
A1CF-202ENST00000373993 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
A1CF-202ENST00000373993 NFKBIEO00221 500 aa16.5■□□□□ 0.23
A1CF-202ENST00000373993 KIF3CO14782 793 aa16.5■□□□□ 0.23
A1CF-202ENST00000373993 POLR3GO15318 223 aaPredicted RBP16.5■□□□□ 0.23
A1CF-202ENST00000373993 KIF1CO43896 1103 aaKnown RBP16.5■□□□□ 0.23
A1CF-202ENST00000373993 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
A1CF-202ENST00000373993 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
A1CF-202ENST00000373993 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
A1CF-202ENST00000373993 LMNB1P20700 586 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 CORO7P57737 925 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 STYK1Q6J9G0 422 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 TRIM65Q6PJ69 517 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms