RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CTDSPL2Q05D32 466 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 SKOR2Q2VWA4 1001 aaPredicted RBP18.52■□□□□ 0.55
HDAC8-209ENST00000373589 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 SMARCC2Q8TAQ2 1214 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 SDR42E1Q8WUS8 393 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 STAG1Q8WVM7 1258 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.55
HDAC8-209ENST00000373589 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-209ENST00000373589 PDCP20941 246 aa18.51■□□□□ 0.55
HDAC8-209ENST00000373589 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
HDAC8-209ENST00000373589 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
HDAC8-209ENST00000373589 CNNM2Q9H8M5 875 aa18.51■□□□□ 0.55
HDAC8-209ENST00000373589 ANAPC4Q9UJX5 808 aa18.51■□□□□ 0.55
HDAC8-209ENST00000373589 B4E1Z4 1266 aa18.5■□□□□ 0.55
HDAC8-209ENST00000373589 JAK2O60674 1132 aa18.5■□□□□ 0.55
HDAC8-209ENST00000373589 F13A1P00488 732 aa18.5■□□□□ 0.55
HDAC8-209ENST00000373589 LDHBP07195 334 aaKnown RBP18.5■□□□□ 0.55
HDAC8-209ENST00000373589 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
HDAC8-209ENST00000373589 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
HDAC8-209ENST00000373589 CTDNEP1O95476 244 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 DZIP1Q86YF9 867 aaKnown RBP18.49■□□□□ 0.55
HDAC8-209ENST00000373589 NSUN7Q8NE18 718 aaKnown RBP18.49■□□□□ 0.55
HDAC8-209ENST00000373589 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 INCENPQ9NQS7 918 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 C6orf229H3BNL8 230 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
HDAC8-209ENST00000373589 PPARAQ07869 468 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 MFSD6Q6ZSS7 791 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 TMEM87BQ96K49 555 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 KRT23Q9C075 422 aa18.49■□□□□ 0.55
HDAC8-209ENST00000373589 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDAC8-209ENST00000373589 ANGEL1Q9UNK9 670 aaKnown RBP18.49■□□□□ 0.55
HDAC8-209ENST00000373589 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
HDAC8-209ENST00000373589 BAG6P46379 1132 aa18.48■□□□□ 0.55
HDAC8-209ENST00000373589 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
HDAC8-209ENST00000373589 GRIK5Q16478 980 aa18.48■□□□□ 0.55
HDAC8-209ENST00000373589 IGDCC4Q8TDY8 1250 aa18.48■□□□□ 0.55
HDAC8-209ENST00000373589 RNF41Q9H4P4 317 aaPredicted RBP18.48■□□□□ 0.55
HDAC8-209ENST00000373589 ZSWIM5Q9P217 1185 aa18.48■□□□□ 0.55
HDAC8-209ENST00000373589 HPS5Q9UPZ3 1129 aa18.48■□□□□ 0.55
HDAC8-209ENST00000373589 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
HDAC8-209ENST00000373589 STYK1Q6J9G0 422 aa18.47■□□□□ 0.55
HDAC8-209ENST00000373589 C2CD5Q86YS7 1000 aa18.47■□□□□ 0.55
HDAC8-209ENST00000373589 MPNDQ8N594 471 aa18.47■□□□□ 0.55
HDAC8-209ENST00000373589 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
HDAC8-209ENST00000373589 NCOA5Q9HCD5 579 aaKnown RBP18.47■□□□□ 0.55
HDAC8-209ENST00000373589 FAM205AQ6ZU69 1335 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 KDM4AO75164 1064 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 PRPF40AO75400 957 aaKnown RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 GSTO1P78417 241 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 ATP8A2Q9NTI2 1148 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 CHD4Q14839 1912 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 VPS37CA5D8V6 355 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 CTR9Q6PD62 1173 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 SGMS1Q86VZ5 419 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 MTA3Q9BTC8 594 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 COA1Q9GZY4 146 aa18.46■□□□□ 0.55
HDAC8-209ENST00000373589 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-209ENST00000373589 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 MINDY4BA8MYZ0 360 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 H0YIN7 160 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 FGRP09769 529 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 LIFRP42702 1097 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 PPP4CP60510 307 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 DPP8Q6V1X1 898 aaPredicted RBP18.45■□□□□ 0.54
HDAC8-209ENST00000373589 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 ZNF622Q969S3 477 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC8-209ENST00000373589 LY9Q9HBG7 655 aa18.45■□□□□ 0.54
HDAC8-209ENST00000373589 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
HDAC8-209ENST00000373589 SMIM22K7EJ46 135 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 LDHCP07864 332 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 PCP11498 1178 aaKnown RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 DIXDC1Q155Q3 683 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 SBK1Q52WX2 424 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 TMEM67Q5HYA8 995 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 ZC3H12CQ9C0D7 883 aaKnown RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 SENP2Q9HC62 589 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 MKRN1Q9UHC7 482 aaKnown RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 USP17L12C9JPN9 530 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 USP17L21D6R901 530 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 APOA5Q6Q788 366 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms