RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 C4BP0C0L5 1744 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 GSG1L2A8MUP6 293 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 GNAT2P19087 354 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 STX1AQ16623 288 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 MICU3Q86XE3 530 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 CDC5LQ99459 802 aaKnown RBP33.68■■■□□ 2.98
SSBP3-204ENST00000371320 ALG1Q9BT22 464 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 LY9Q9HBG7 655 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 DOCK2Q92608 1830 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 KIF28PB7ZC32 967 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 NACAP1Q9BZK3 213 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 CNNM2Q9H8M5 875 aa33.68■■■□□ 2.98
SSBP3-204ENST00000371320 CICQ96RK0 1608 aaPredicted RBP33.68■■■□□ 2.98
SSBP3-204ENST00000371320 CDC27P30260 824 aa33.67■■■□□ 2.98
SSBP3-204ENST00000371320 NOLC1Q14978 699 aaKnown RBP eCLIP33.67■■■□□ 2.98
SSBP3-204ENST00000371320 SGMS1Q86VZ5 419 aa33.67■■■□□ 2.98
SSBP3-204ENST00000371320 LRP2BPQ9P2M1 347 aa33.67■■■□□ 2.98
SSBP3-204ENST00000371320 CLEC4GQ6UXB4 293 aa33.67■■■□□ 2.98
SSBP3-204ENST00000371320 ZSWIM5Q9P217 1185 aa33.67■■■□□ 2.98
SSBP3-204ENST00000371320 PNPLA7Q6ZV29 1317 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 SPTLC2O15270 562 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 PRKAB2O43741 272 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 AKNAD1Q5T1N1 836 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 FMR1NBQ8N0W7 255 aaPredicted RBP33.66■■■□□ 2.98
SSBP3-204ENST00000371320 LCORLQ8N3X6 602 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 TRIM5Q9C035 493 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 SLC4A4Q9Y6R1 1079 aa33.66■■■□□ 2.98
SSBP3-204ENST00000371320 LIFRP42702 1097 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 TDO2P48775 406 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 CCDC144CPQ8IYA2 1237 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 KRT23Q9C075 422 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 GOLGA8AA7E2F4 631 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 IFIT3O14879 490 aaKnown RBP33.65■■■□□ 2.98
SSBP3-204ENST00000371320 MFSD6Q6ZSS7 791 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 AIFM3Q96NN9 605 aa33.65■■■□□ 2.98
SSBP3-204ENST00000371320 A0A1B0GVL5 298 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 ZNF75DP51815 510 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 PLA2G4DQ86XP0 818 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 PHKBQ93100 1093 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 KCNF1Q9H3M0 494 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 LAMB2P55268 1798 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 ANO1Q5XXA6 986 aa33.64■■■□□ 2.98
SSBP3-204ENST00000371320 C11orf57Q6ZUT1 292 aaPredicted RBP33.64■■■□□ 2.98
SSBP3-204ENST00000371320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP33.63■■■□□ 2.97
SSBP3-204ENST00000371320 IQCB1Q15051 598 aa33.63■■■□□ 2.97
SSBP3-204ENST00000371320 SLC12A7Q9Y666 1083 aa33.63■■■□□ 2.97
SSBP3-204ENST00000371320 TACC3Q9Y6A5 838 aa33.63■■■□□ 2.97
SSBP3-204ENST00000371320 GOLGA6L19H0YKK7 550 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 TOM1O60784 492 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 IARSP41252 1262 aaKnown RBP33.62■■■□□ 2.97
SSBP3-204ENST00000371320 NDUFA8P51970 172 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 ERFEQ4G0M1 354 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 ANKRD18AQ8IVF6 992 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 ANO10Q9NW15 660 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 CCDC69A6NI79 296 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 DNTTIP2Q5QJE6 756 aaKnown RBP33.62■■■□□ 2.97
SSBP3-204ENST00000371320 KRT40Q6A162 431 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 DRC7Q8IY82 874 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 MIGA1Q8NAN2 632 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 SDF4Q9BRK5 362 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 MYL10Q9BUA6 226 aa33.62■■■□□ 2.97
SSBP3-204ENST00000371320 NTRK3Q16288 839 aa33.61■■■□□ 2.97
SSBP3-204ENST00000371320 ARHGAP30Q7Z6I6 1101 aaPredicted RBP33.61■■■□□ 2.97
SSBP3-204ENST00000371320 C17orf53Q8N3J3 647 aaPredicted RBP33.61■■■□□ 2.97
SSBP3-204ENST00000371320 LINC00116Q8NCU8 138 aa33.61■■■□□ 2.97
SSBP3-204ENST00000371320 STAG1Q8WVM7 1258 aa33.61■■■□□ 2.97
SSBP3-204ENST00000371320 IQSEC3Q9UPP2 1182 aaPredicted RBP33.61■■■□□ 2.97
SSBP3-204ENST00000371320 FAM217BQ9NTX9 383 aaPredicted RBP33.6■■■□□ 2.97
SSBP3-204ENST00000371320 SPTLC3Q9NUV7 552 aa33.6■■■□□ 2.97
SSBP3-204ENST00000371320 VPS37DQ86XT2 251 aa33.6■■■□□ 2.97
SSBP3-204ENST00000371320 BCL9LQ86UU0 1499 aa33.59■■■□□ 2.97
SSBP3-204ENST00000371320 RRP12Q5JTH9 1297 aaKnown RBP33.59■■■□□ 2.97
SSBP3-204ENST00000371320 TOMM22Q9NS69 142 aa33.59■■■□□ 2.97
SSBP3-204ENST00000371320 GNL3LQ9NVN8 582 aaKnown RBP33.59■■■□□ 2.97
SSBP3-204ENST00000371320 CYP7A1P22680 504 aa33.59■■■□□ 2.97
SSBP3-204ENST00000371320 GNL2Q13823 731 aaKnown RBP33.59■■■□□ 2.97
SSBP3-204ENST00000371320 SF3B3Q15393 1217 aaKnown RBP33.59■■■□□ 2.97
SSBP3-204ENST00000371320 RANBP6O60518 1105 aaKnown RBP33.58■■■□□ 2.97
SSBP3-204ENST00000371320 PTGS1P23219 599 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 TRIM29Q14134 588 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 C3orf67Q6ZVT6 689 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 KIAA1524Q8TCG1 905 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 TAOK2Q9UL54 1235 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 ZNF804BA4D1E1 1349 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 TIAM2Q8IVF5 1701 aa33.58■■■□□ 2.97
SSBP3-204ENST00000371320 SART3Q15020 963 aaKnown RBP33.57■■■□□ 2.97
SSBP3-204ENST00000371320 ABCF2Q9UG63 623 aa33.57■■■□□ 2.97
SSBP3-204ENST00000371320 GYG1P46976 350 aa33.57■■■□□ 2.96
SSBP3-204ENST00000371320 FAM98CQ17RN3 349 aaKnown RBP33.57■■■□□ 2.96
SSBP3-204ENST00000371320 BSDC1Q9NW68 430 aaPredicted RBP33.57■■■□□ 2.96
SSBP3-204ENST00000371320 PYCARDQ9ULZ3 195 aa33.57■■■□□ 2.96
SSBP3-204ENST00000371320 BECN2A8MW95 431 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 SSRP1Q08945 709 aaKnown RBP33.56■■■□□ 2.96
SSBP3-204ENST00000371320 UBE4AQ14139 1066 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 SLC39A14Q15043 492 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 COL4A1P02462 1669 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 COL5A3P25940 1745 aaPredicted RBP33.56■■■□□ 2.96
SSBP3-204ENST00000371320 BCORQ6W2J9 1755 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 CCDC186Q7Z3E2 898 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 ERCC4Q92889 916 aaPredicted RBP33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms