RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 C7orf43Q8WVR3 580 aa19.9■□□□□ 0.78
PHGDH-202ENST00000369409 BRF1Q92994 677 aa19.9■□□□□ 0.78
PHGDH-202ENST00000369409 FBXW7Q969H0 707 aa19.9■□□□□ 0.78
PHGDH-202ENST00000369409 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-202ENST00000369409 GSTO1P78417 241 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 CTDSPL2Q05D32 466 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 ST3GAL1Q11201 340 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 RAB3GAP1Q15042 981 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 TBC1D22AQ8WUA7 517 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
PHGDH-202ENST00000369409 MTFR1LQ9H019 292 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 BRCA1P38398 1863 aaKnown RBP19.89■□□□□ 0.77
PHGDH-202ENST00000369409 NEDD4P46934 1319 aa19.89■□□□□ 0.77
PHGDH-202ENST00000369409 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 G3V3G9 751 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 DPEP1P16444 411 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 TRDNQ13061 729 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 DCAF8Q5TAQ9 597 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 CRNKL1Q9BZJ0 848 aaKnown RBP19.88■□□□□ 0.77
PHGDH-202ENST00000369409 MROH7-TTC4A0A0A0MT08 1334 aa19.88■□□□□ 0.77
PHGDH-202ENST00000369409 PRC1O43663 620 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 C21orf2O43822 256 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 POLD1P28340 1107 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 MCM5P33992 734 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 STK3Q13188 491 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 PKP1Q13835 747 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 TTLL6Q8N841 843 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 RTFDC1Q9BY42 306 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-202ENST00000369409 AGXT2Q9BYV1 514 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 DBNDD1Q9H9R9 158 aa19.87■□□□□ 0.77
PHGDH-202ENST00000369409 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-202ENST00000369409 ANTXR2P58335 489 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 CC2D2BQ6DHV5 1058 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 FOCADQ5VW36 1801 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 B4E1Z4 1266 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 KCNA3P22001 575 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 NUCB2P80303 420 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 PPARAQ07869 468 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 APOBRQ0VD83 1088 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 NKX2-3Q8TAU0 364 aa19.86■□□□□ 0.77
PHGDH-202ENST00000369409 TNPO1Q92973 898 aaKnown RBP19.86■□□□□ 0.77
PHGDH-202ENST00000369409 NOL10Q9BSC4 688 aaKnown RBP19.86■□□□□ 0.77
PHGDH-202ENST00000369409 MINDY4BA8MYZ0 360 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 LDHCP07864 332 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 AKNAD1Q5T1N1 836 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 INCENPQ9NQS7 918 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 SMC3Q9UQE7 1217 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 TACC3Q9Y6A5 838 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 PSME4Q14997 1843 aa19.85■□□□□ 0.77
PHGDH-202ENST00000369409 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
PHGDH-202ENST00000369409 GIMAP6Q6P9H5 292 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 CYB5R4Q7L1T6 521 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 STK11IPQ8N1F8 1099 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 STAG1Q8WVM7 1258 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 GPHNQ9NQX3 736 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-202ENST00000369409 WDR19Q8NEZ3 1342 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 DTNBO60941 627 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 AOC3Q16853 763 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 MFSD6Q6ZSS7 791 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 CERS5Q8N5B7 392 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 SH3RF3Q8TEJ3 882 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-202ENST00000369409 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
PHGDH-202ENST00000369409 DCP1AQ9NPI6 582 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-202ENST00000369409 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 ECE2O60344 883 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 BAG3O95817 575 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 BTDP43251 543 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 CCDC93Q567U6 631 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 PODNQ7Z5L7 613 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 FBXL16Q8N461 479 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 MXD3Q9BW11 206 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 CNNM2Q9H8M5 875 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 ATP8A2Q9NTI2 1148 aa19.83■□□□□ 0.76
PHGDH-202ENST00000369409 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
PHGDH-202ENST00000369409 PSDA5PKW4 1024 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-202ENST00000369409 SMIM22K7EJ46 135 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 CTR9Q6PD62 1173 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 SUPT20HQ8NEM7 779 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 MYH1P12882 1939 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 ECM29Q5VYK3 1845 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 F8W031 263 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-202ENST00000369409 GJB2P29033 226 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 PPP4CP60510 307 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 RRP12Q5JTH9 1297 aaKnown RBP19.82■□□□□ 0.76
PHGDH-202ENST00000369409 SLF2Q8IX21 1173 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 KRT23Q9C075 422 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 RNF41Q9H4P4 317 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-202ENST00000369409 NAP1L2Q9ULW6 460 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-202ENST00000369409 SUGT1Q9Y2Z0 365 aa19.82■□□□□ 0.76
PHGDH-202ENST00000369409 GAKO14976 1311 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 USP17L12C9JPN9 530 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 USP17L21D6R901 530 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 KDM4AO75164 1064 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 USP5P45974 858 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 KCNQ5Q9NR82 932 aa19.81■□□□□ 0.76
PHGDH-202ENST00000369409 ARPP21Q9UBL0 812 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms