RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 A0A0D9SFI3 127 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 SMC2O95347 1197 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 NAIF1Q69YI7 327 aaPredicted RBP17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 PSMD1Q99460 953 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 EVI5LQ96CN4 794 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 PAG1Q9NWQ8 432 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 ACTN2P35609 894 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 PTH1RQ03431 593 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 SCARF1Q14162 830 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 AKAP2Q9Y2D5 859 aa17.73■□□□□ 0.43
SEMA6C-202ENST00000368912 SEC31AO94979 1220 aaKnown RBP17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 ATG9AQ7Z3C6 839 aa17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 IRAK4Q9NWZ3 460 aa17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 ECM2O94769 699 aaPredicted RBP17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 NFIXQ14938 502 aa17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
SEMA6C-202ENST00000368912 F8W031 263 aaPredicted RBP17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 GBP6Q6ZN66 633 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 FILIP1Q7Z7B0 1213 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 COL18A1P39060 1754 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 KIF2AO00139 706 aaPredicted RBP17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 LIG1P18858 919 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
SEMA6C-202ENST00000368912 USP8P40818 1118 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 CASP7P55210 303 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 SLC5A1P13866 664 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 MTX1Q13505 466 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 SLIT2O94813 1529 aa17.7■□□□□ 0.42
SEMA6C-202ENST00000368912 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 CHRNDQ07001 517 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 TTC36A6NLP5 189 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 FAM53CQ9NYF3 392 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 SERPINB2P05120 415 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
SEMA6C-202ENST00000368912 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 DISP2A7MBM2 1401 aa17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 AP5Z1O43299 807 aa17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 FIBPO43427 364 aa17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 CEP89Q96ST8 783 aa17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 RBM8AQ9Y5S9 174 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-202ENST00000368912 ZSCAN25Q6NSZ9 544 aa17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 PLEKHA4Q9H4M7 779 aa17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 CPSF2Q9P2I0 782 aaKnown RBP17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 ADAM21Q9UKJ8 722 aa17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 COL16A1Q07092 1604 aaPredicted RBP17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 MMP10P09238 476 aa17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 SWT1Q5T5J6 900 aaKnown RBP17.67■□□□□ 0.42
SEMA6C-202ENST00000368912 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 NHSL1Q5SYE7 1610 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 JPH2Q9BR39 696 aaPredicted RBP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 VPS18Q9P253 973 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 PDE8BO95263 885 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 FOXR1Q6PIV2 292 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 UTRNP46939 3433 aa17.66■□□□□ 0.42
SEMA6C-202ENST00000368912 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 NTSR2O95665 410 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 CCDC192P0DO97 292 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 CCAR2Q8N163 923 aaKnown RBP17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 CAND2O75155 1236 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 MAGEB6Q8N7X4 407 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 NECAB1Q8N987 351 aa17.65■□□□□ 0.42
SEMA6C-202ENST00000368912 JMYQ8N9B5 988 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms