RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PRPHP41219 470 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 ANO3Q9BYT9 981 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 SEPT14Q6ZU15 432 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 NCOA1Q15788 1441 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 TIMM10P62072 90 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 UTP14CQ5TAP6 766 aaKnown RBP20.4■□□□□ 0.86
SNX27-202ENST00000368841 SV2BQ7L1I2 683 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 CCT6BQ92526 530 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 EPB41P11171 864 aaKnown RBP20.39■□□□□ 0.86
SNX27-202ENST00000368841 PDE4DQ08499 809 aa20.39■□□□□ 0.86
SNX27-202ENST00000368841 CCDC122Q5T0U0 273 aa20.39■□□□□ 0.86
SNX27-202ENST00000368841 PICK1Q9NRD5 415 aa20.39■□□□□ 0.86
SNX27-202ENST00000368841 VIMP08670 466 aaKnown RBP20.39■□□□□ 0.85
SNX27-202ENST00000368841 PSMD6Q15008 389 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 OTUD7BQ6GQQ9 843 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 SPOPO43791 374 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 WDR44Q5JSH3 913 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 DDX12PQ92771 950 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 BMP15O95972 392 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 HSPA2P54652 639 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 DYMQ7RTS9 669 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 DYNC1I1O14576 645 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 EP400NLQ6ZTU2 488 aa20.39■□□□□ 0.85
SNX27-202ENST00000368841 KRT19P08727 400 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 HSPA1LP34931 641 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 CEP85Q6P2H3 762 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 CADPS2Q86UW7 1296 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 CPXCR1Q8N123 301 aa20.38■□□□□ 0.85
SNX27-202ENST00000368841 EPSTI1Q96J88 318 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 PTPROQ16827 1216 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 ANKRD36BQ8N2N9 1353 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 ITGA6P23229 1130 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 SPOUT1Q5T280 376 aaKnown RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 CCDC117Q8IWD4 279 aaPredicted RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 ZNF526Q8TF50 670 aaPredicted RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 CALML3P27482 149 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 TRIM6Q9C030 488 aaPredicted RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 STMN4Q9H169 189 aaPredicted RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 TMOD4Q9NZQ9 345 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 TRAPPC3LQ5T215 181 aa20.37■□□□□ 0.85
SNX27-202ENST00000368841 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
SNX27-202ENST00000368841 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
SNX27-202ENST00000368841 SLU7O95391 586 aaKnown RBP20.36■□□□□ 0.85
SNX27-202ENST00000368841 LRMPQ12912 555 aa20.36■□□□□ 0.85
SNX27-202ENST00000368841 GAS8O95995 478 aa20.36■□□□□ 0.85
SNX27-202ENST00000368841 GNAT2P19087 354 aa20.36■□□□□ 0.85
SNX27-202ENST00000368841 TNFAIP3P21580 790 aa20.36■□□□□ 0.85
SNX27-202ENST00000368841 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX27-202ENST00000368841 ATP2A2P16615 1042 aaKnown RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 C17orf53Q8N3J3 647 aaPredicted RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 NOP56O00567 594 aaKnown RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 HDAC1Q13547 482 aaPredicted RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 RPUSD2Q8IZ73 545 aaKnown RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 TRPC3Q13507 836 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 EAPPQ56P03 285 aaPredicted RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 NELFCDQ8IXH7 590 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 GNA11P29992 359 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 RLBP1P12271 317 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 CEP85LQ5SZL2 805 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 PRIMPOLQ96LW4 560 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 NACA2Q9H009 215 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 FAM204AQ9H8W3 233 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 MYO1AQ9UBC5 1043 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 FANCAO15360 1455 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 TTC36A6NLP5 189 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 SPAG1Q07617 926 aa20.35■□□□□ 0.85
SNX27-202ENST00000368841 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
SNX27-202ENST00000368841 TNRQ92752 1358 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 MSANTD4Q8NCY6 345 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 PHKBQ93100 1093 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 BLZF1Q9H2G9 400 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 SEC24BO95487 1268 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 ASIC2Q16515 512 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 G2E3Q7L622 706 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 FMNL3Q8IVF7 1028 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 STAMQ92783 540 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 INF2Q27J81 1249 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 FAM173BQ6P4H8 233 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 BAG1Q99933 345 aaPredicted RBP20.34■□□□□ 0.85
SNX27-202ENST00000368841 POLR2DO15514 142 aaKnown RBP20.34■□□□□ 0.85
SNX27-202ENST00000368841 PPP2R3AQ06190 1150 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 STRN3Q13033 797 aa20.34■□□□□ 0.85
SNX27-202ENST00000368841 CMTR1Q8N1G2 835 aaKnown RBP20.34■□□□□ 0.85
SNX27-202ENST00000368841 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
SNX27-202ENST00000368841 CCDC14Q49A88 953 aa20.33■□□□□ 0.85
SNX27-202ENST00000368841 STX10O60499 249 aa20.33■□□□□ 0.85
SNX27-202ENST00000368841 RDH13Q8NBN7 331 aa20.33■□□□□ 0.85
SNX27-202ENST00000368841 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
SNX27-202ENST00000368841 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
SNX27-202ENST00000368841 AKR1B15C9JRZ8 316 aaPredicted RBP20.33■□□□□ 0.85
SNX27-202ENST00000368841 U2AF2P26368 475 aaKnown RBP eCLIP20.33■□□□□ 0.853e-9■■■■■ 28.8
SNX27-202ENST00000368841 IFRD2Q12894 506 aaPredicted RBP20.33■□□□□ 0.85
SNX27-202ENST00000368841 CNBD1Q8NA66 436 aa20.33■□□□□ 0.84
SNX27-202ENST00000368841 SAMD15Q9P1V8 674 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms