RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 GIMAP6Q6P9H5 292 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 DDRGK1Q96HY6 314 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 MXD3Q9BW11 206 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 SERPINA10Q9UK55 444 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 MYH2Q9UKX2 1941 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 ZNF646O15015 1829 aaPredicted RBP14.68□□□□□ -0.06
TUBE1-202ENST00000368662 F8W031 263 aaPredicted RBP14.68□□□□□ -0.06
TUBE1-202ENST00000368662 FOXP2O15409 715 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 FGAP02671 866 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 BTDP43251 543 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 CXCL9Q07325 125 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 KRT32Q14532 448 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 RABEP1Q15276 862 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
TUBE1-202ENST00000368662 TSGA10IPQ3SY00 556 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 KIAA0825Q8IV33 1275 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 GSG1L2A8MUP6 293 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 FZD9O00144 591 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 SLC27A2O14975 620 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 DYNLL1P63167 89 aaKnown RBP14.68□□□□□ -0.06
TUBE1-202ENST00000368662 IFNL3Q8IZI9 196 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 NAPBQ9H115 298 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 ATP8A2Q9NTI2 1148 aa14.68□□□□□ -0.06
TUBE1-202ENST00000368662 YBX3P16989 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
TUBE1-202ENST00000368662 RPS12P25398 132 aaKnown RBP14.67□□□□□ -0.06
TUBE1-202ENST00000368662 KIF2CQ99661 725 aa14.67□□□□□ -0.06
TUBE1-202ENST00000368662 PALD1Q9ULE6 856 aa14.67□□□□□ -0.06
TUBE1-202ENST00000368662 DAGLAQ9Y4D2 1042 aa14.67□□□□□ -0.06
TUBE1-202ENST00000368662 SNX14Q9Y5W7 946 aa14.67□□□□□ -0.06
TUBE1-202ENST00000368662 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 CYP21A2P08686 494 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 CRKP46108 304 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 TDO2P48775 406 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 ZDHHC15Q96MV8 337 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 GMLQ99445 158 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 ZNF213O14771 459 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 PSMA5P28066 241 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 SCNN1DP51172 638 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 PRELPP51888 382 aa14.66□□□□□ -0.06
TUBE1-202ENST00000368662 PRKAB2O43741 272 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 GPR162Q16538 588 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 RASEFQ8IZ41 740 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 SDR42E1Q8WUS8 393 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 TM6SF1Q9BZW5 370 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 EPB41L4AQ9HCS5 686 aaPredicted RBP14.65□□□□□ -0.06
TUBE1-202ENST00000368662 USP17L8P0C7I0 530 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 USP5P45974 858 aa14.65□□□□□ -0.06
TUBE1-202ENST00000368662 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
TUBE1-202ENST00000368662 DICER1Q9UPY3 1922 aaKnown RBP14.64□□□□□ -0.07
TUBE1-202ENST00000368662 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
TUBE1-202ENST00000368662 RHBDL3P58872 404 aa14.64□□□□□ -0.07
TUBE1-202ENST00000368662 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
TUBE1-202ENST00000368662 DCP1AQ9NPI6 582 aaPredicted RBP14.64□□□□□ -0.07
TUBE1-202ENST00000368662 ARPP21Q9UBL0 812 aaPredicted RBP14.64□□□□□ -0.07
TUBE1-202ENST00000368662 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
TUBE1-202ENST00000368662 APOBEC3HQ6NTF7 200 aaKnown RBP14.63□□□□□ -0.07
TUBE1-202ENST00000368662 AMOTL1Q8IY63 956 aa14.63□□□□□ -0.07
TUBE1-202ENST00000368662 DPF2Q92785 391 aa14.63□□□□□ -0.07
TUBE1-202ENST00000368662 ST18O60284 1047 aa14.63□□□□□ -0.07
TUBE1-202ENST00000368662 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
TUBE1-202ENST00000368662 SBF1O95248 1867 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 CFAP100Q494V2 611 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 MTMR14Q8NCE2 650 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 JAKMIP1Q96N16 626 aaKnown RBP14.62□□□□□ -0.07
TUBE1-202ENST00000368662 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
TUBE1-202ENST00000368662 BECN1Q14457 450 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 SBK1Q52WX2 424 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 CDC42EP5Q6NZY7 148 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 GPC2Q8N158 579 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 TGFBRAP1Q8WUH2 860 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 ZSWIM6Q9HCJ5 1215 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 RNF181Q9P0P0 153 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
TUBE1-202ENST00000368662 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 CYP46A1Q9Y6A2 500 aa14.62□□□□□ -0.07
TUBE1-202ENST00000368662 E7EWF7 191 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 NEK4P51957 841 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 HAND2P61296 217 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 PPARAQ07869 468 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 TRDNQ13061 729 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 DLGAP5Q15398 846 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 BLOC1S2Q6QNY1 142 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
TUBE1-202ENST00000368662 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 FLT1P17948 1338 aa14.61□□□□□ -0.07
TUBE1-202ENST00000368662 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 SLC3A2P08195 630 aaKnown RBP14.6□□□□□ -0.07
TUBE1-202ENST00000368662 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
TUBE1-202ENST00000368662 ADCK5Q3MIX3 580 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 RUFY3Q7L099 469 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 SNX21Q969T3 373 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 GJA3Q9Y6H8 435 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 ZNF541Q9H0D2 1346 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms