RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 BTDP43251 543 aa18.36■□□□□ 0.53
SMPDL3A-201ENST00000368440 CDAN1Q8IWY9 1227 aa18.36■□□□□ 0.53
SMPDL3A-201ENST00000368440 HAUS7Q99871 368 aa18.36■□□□□ 0.53
SMPDL3A-201ENST00000368440 GSTO1P78417 241 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 NAA16Q6N069 864 aaPredicted RBP18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 USP40Q9NVE5 1235 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 NFIAQ12857 509 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 TMEM39BQ9GZU3 492 aa18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 ABT1Q9ULW3 272 aaKnown RBP18.35■□□□□ 0.53
SMPDL3A-201ENST00000368440 RFX7Q2KHR2 1363 aa18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 TNFAIP1Q13829 316 aa18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 ZBTB47Q9UFB7 747 aaPredicted RBP18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 FZD1Q9UP38 647 aa18.34■□□□□ 0.53
SMPDL3A-201ENST00000368440 FOCADQ5VW36 1801 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 LDHCP07864 332 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 MX1P20591 662 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 RHBDL3P58872 404 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 NBPF12Q5TAG4 269 aaPredicted RBP18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 MOB2Q70IA6 237 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 DNAJC5GQ8N7S2 189 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 TEPSINQ96N21 525 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 TLL2Q9Y6L7 1015 aa18.33■□□□□ 0.53
SMPDL3A-201ENST00000368440 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.52
SMPDL3A-201ENST00000368440 NUCB1Q02818 461 aa18.33■□□□□ 0.52
SMPDL3A-201ENST00000368440 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.52
SMPDL3A-201ENST00000368440 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
SMPDL3A-201ENST00000368440 CYP7A1P22680 504 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 TCP10Q12799 353 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 PRKG1Q13976 671 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 FKBP1CQ5VVH2 108 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMPDL3A-201ENST00000368440 OTOFQ9HC10 1997 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 WDHD1O75717 1129 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 CHGBP05060 677 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 TNNI2P48788 182 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 ZFPM1Q8IX07 1006 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 RASSF10A6NK89 507 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 PDE6AP16499 860 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 FAM83AQ86UY5 434 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 C2orf69Q8N8R5 385 aa18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-201ENST00000368440 RGS3P49796 1198 aa18.3■□□□□ 0.52
SMPDL3A-201ENST00000368440 HUNKP57058 714 aa18.3■□□□□ 0.52
SMPDL3A-201ENST00000368440 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
SMPDL3A-201ENST00000368440 MIGA1Q8NAN2 632 aa18.3■□□□□ 0.52
SMPDL3A-201ENST00000368440 IDI2Q9BXS1 227 aa18.3■□□□□ 0.52
SMPDL3A-201ENST00000368440 IGSF3O75054 1194 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 NF2P35240 595 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 PDE1AP54750 535 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 KLRG1Q96E93 195 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 TCRBV5S4A2TA0A5A2 114 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 ERC2O15083 957 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 PICALMQ13492 652 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
SMPDL3A-201ENST00000368440 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
SMPDL3A-201ENST00000368440 PPP4CP60510 307 aa18.28■□□□□ 0.52
SMPDL3A-201ENST00000368440 CYP4F22Q6NT55 531 aa18.28■□□□□ 0.52
SMPDL3A-201ENST00000368440 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
SMPDL3A-201ENST00000368440 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
SMPDL3A-201ENST00000368440 BAG3O95817 575 aa18.27■□□□□ 0.52
SMPDL3A-201ENST00000368440 ADD2P35612 726 aa18.27■□□□□ 0.52
SMPDL3A-201ENST00000368440 VEGFBP49765 207 aa18.27■□□□□ 0.52
SMPDL3A-201ENST00000368440 SUPT20HL1Q3ZLR7 823 aa18.27■□□□□ 0.52
SMPDL3A-201ENST00000368440 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
SMPDL3A-201ENST00000368440 SIPA1L1O43166 1804 aa18.27■□□□□ 0.51
SMPDL3A-201ENST00000368440 FKBP1BP68106 108 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 SH3BP5LQ7L8J4 393 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 ANGEL1Q9UNK9 670 aaKnown RBP18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 ENTPD3O75355 529 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 PDE4AP27815 886 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 GRM1Q13255 1194 aa18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms