RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 TSPAN15O95858 294 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 FAM87AP0C7U9 286 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 KCNMB1Q16558 191 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 AOC3Q16853 763 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 FLAD1Q8NFF5 587 aa6.78□□□□□ -1.32
ECHDC1-201ENST00000368287 PCDH1Q08174 1060 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 CDK5R2Q13319 367 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 ARHGAP27Q6ZUM4 889 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 SIAH1Q8IUQ4 282 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 ARID3AQ99856 593 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
ECHDC1-201ENST00000368287 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 MZF1P28698 734 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 BUD31P41223 144 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 SNX29Q8TEQ0 813 aa6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 CCDC97Q96F63 343 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
ECHDC1-201ENST00000368287 TNFRSF21O75509 655 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 ZNF423Q2M1K9 1284 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 NOM1Q5C9Z4 860 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 PEAR1Q5VY43 1037 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 SLC23A3Q6PIS1 610 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 SEPT3Q9UH03 358 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 SERPINA10Q9UK55 444 aa6.75□□□□□ -1.33
ECHDC1-201ENST00000368287 AOC2O75106 756 aa6.74□□□□□ -1.33
ECHDC1-201ENST00000368287 ECEL1O95672 775 aa6.74□□□□□ -1.33
ECHDC1-201ENST00000368287 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
ECHDC1-201ENST00000368287 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-201ENST00000368287 AMOTL2Q9Y2J4 779 aa6.74□□□□□ -1.33
ECHDC1-201ENST00000368287 TMEM265A0A087WTH1 108 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 A0A096LPE4 126 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 CEACAM5P06731 702 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 ECM1Q16610 540 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 TTLL10Q6ZVT0 673 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 SYDE1Q6ZW31 735 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 CCDC82Q8N4S0 544 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 LIN37Q96GY3 246 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 PIDD1Q9HB75 910 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 U3KQE9 123 aa6.73□□□□□ -1.33
ECHDC1-201ENST00000368287 TMEM164Q5U3C3 297 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 HELQQ8TDG4 1101 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 TRIM56Q9BRZ2 755 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 PRDM7Q9NQW5 492 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 PPP1R9AQ9ULJ8 1098 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 POLIQ9UNA4 740 aa6.72□□□□□ -1.33
ECHDC1-201ENST00000368287 EIF1AXP47813 144 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-201ENST00000368287 OXCT1P55809 520 aa6.7□□□□□ -1.34
ECHDC1-201ENST00000368287 EHHADHQ08426 723 aa6.7□□□□□ -1.34
ECHDC1-201ENST00000368287 SYNGAP1Q96PV0 1343 aa6.7□□□□□ -1.34
ECHDC1-201ENST00000368287 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 NFIBO00712 420 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 TMPRSS2O15393 492 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 LEFTY1O75610 366 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 ITIH2P19823 946 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 MPSTP25325 297 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 SPRED3Q2MJR0 410 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 MPZL3Q6UWV2 235 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 CCNJLQ8IV13 435 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 ATXN3LQ9H3M9 355 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 PLAGL2Q9UPG8 496 aa6.69□□□□□ -1.34
ECHDC1-201ENST00000368287 B3GALT4O96024 378 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 ATP2B4P23634 1241 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 AFMP43652 599 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 GRIA4P48058 902 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 IKZF1Q13422 519 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 ALKBH2Q6NS38 261 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 PRR23BQ6ZRT6 265 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 LIN7BQ9HAP6 207 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 CTNND2Q9UQB3 1225 aa6.68□□□□□ -1.34
ECHDC1-201ENST00000368287 POLR3DP05423 398 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 GLI1P08151 1106 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 ZP2Q05996 745 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 AAMPQ13685 434 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 DUSP23Q9BVJ7 150 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 ZFYVE28Q9HCC9 887 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 SNX11Q9Y5W9 270 aa6.67□□□□□ -1.34
ECHDC1-201ENST00000368287 ATG7O95352 703 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 INHBBP09529 407 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 USP5P45974 858 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 ID3Q02535 119 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms