RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 STXBP4Q6ZWJ1 553 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 MYO9BQ13459 2157 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 FYCO1Q9BQS8 1478 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 CCDC89Q8N998 374 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 DACT3Q96B18 629 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 POLR1AO95602 1720 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-205ENST00000366769 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 RPGRQ92834 1020 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 CUL4BQ13620 913 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 ARMC2Q8NEN0 867 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 SELENOOQ9BVL4 669 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 RNF8O76064 485 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 STX17P56962 302 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 HFM1A2PYH4 1435 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 FANCCQ00597 558 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 GOLGA8AA7E2F4 631 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 BAG2O95816 211 aa12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-205ENST00000366769 CPA1P15085 419 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 SLMAPQ14BN4 828 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PLS1Q14651 629 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 EXOC1Q9NV70 894 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 C6orf229H3BNL8 230 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PDCD2Q16342 344 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 FYB2Q5VWT5 728 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 HSPA1LP34931 641 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 UBA7P41226 1012 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 DDX12PQ92771 950 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 KRT86O43790 486 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 RASA3Q14644 834 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 PAX7P23759 505 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 USP26Q9BXU7 913 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 GOLGA8KD6RF30 607 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 IFT20Q8IY31 132 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
CDC42BPA-205ENST00000366769 FAM169AQ9Y6X4 670 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 KRT71Q3SY84 523 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 NUF2Q9BZD4 464 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 TACC3Q9Y6A5 838 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 LONRF2Q1L5Z9 754 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 BRF1Q92994 677 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 SCOCQ9UIL1 159 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 FAM170AA1A519 330 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 TUBBP07437 444 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 ELF1P32519 619 aa12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-205ENST00000366769 TNNC1P63316 161 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 ANKRD30BQ9BXX2 1392 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 IFIT1P09914 478 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC117Q8IWD4 279 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC65Q8IXS2 484 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 GUCY2CP25092 1073 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 IGBP1P78318 339 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 ST5P78524 1137 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 PRR16Q569H4 304 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 AMPD3Q01432 767 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 KIAA0825Q8IV33 1275 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 RMI1Q9H9A7 625 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 SRLQ86TD4 932 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 CNGA4Q8IV77 575 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
CDC42BPA-205ENST00000366769 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 STARD3NLO95772 234 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms