RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 VIL1P09327 827 aaKnown RBP21.49■■□□□ 1.03
CCDC7-203ENST00000362006 PSMA5P28066 241 aa21.49■■□□□ 1.03
CCDC7-203ENST00000362006 DYNLL1P63167 89 aaKnown RBP21.49■■□□□ 1.03
CCDC7-203ENST00000362006 RASEFQ8IZ41 740 aa21.49■■□□□ 1.03
CCDC7-203ENST00000362006 NAPBQ9H115 298 aa21.49■■□□□ 1.03
CCDC7-203ENST00000362006 BECN1Q14457 450 aa21.48■■□□□ 1.03
CCDC7-203ENST00000362006 RSBN1LQ6PCB5 846 aaPredicted RBP21.48■■□□□ 1.03
CCDC7-203ENST00000362006 TEKT1Q969V4 418 aa21.48■■□□□ 1.03
CCDC7-203ENST00000362006 ATP8A2Q9NTI2 1148 aa21.48■■□□□ 1.03
CCDC7-203ENST00000362006 COL4A5P29400 1685 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 CYP21A2P08686 494 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 ARHGAP27Q6ZUM4 889 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 MXD3Q9BW11 206 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 ZNF213O14771 459 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 TNIP1Q15025 636 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 SNX21Q969T3 373 aa21.47■■□□□ 1.03
CCDC7-203ENST00000362006 F8W031 263 aaPredicted RBP21.46■■□□□ 1.03
CCDC7-203ENST00000362006 PRKAB2O43741 272 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 ST18O60284 1047 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 BTDP43251 543 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 MMP14P50281 582 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 AGBL3Q8NEM8 1001 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 IPO9Q96P70 1041 aaKnown RBP21.46■■□□□ 1.03
CCDC7-203ENST00000362006 DAGLAQ9Y4D2 1042 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 PSMD14O00487 310 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 RAD17O75943 681 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 TDO2P48775 406 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 RASSF7Q02833 373 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 CIAPIN1Q6FI81 312 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 SERPINA10Q9UK55 444 aa21.46■■□□□ 1.03
CCDC7-203ENST00000362006 KIAA0825Q8IV33 1275 aa21.45■■□□□ 1.02
CCDC7-203ENST00000362006 EPB41L4AQ9HCS5 686 aaPredicted RBP21.45■■□□□ 1.02
CCDC7-203ENST00000362006 CXCL9Q07325 125 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 JAKMIP1Q96N16 626 aaKnown RBP21.44■■□□□ 1.02
CCDC7-203ENST00000362006 HDAC9Q9UKV0 1011 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 HMGB1P09429 215 aaKnown RBP21.44■■□□□ 1.02
CCDC7-203ENST00000362006 LMNB1P20700 586 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 CRKP46108 304 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 NEK4P51957 841 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 ZDHHC15Q96MV8 337 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 LAMA4Q16363 1823 aa21.44■■□□□ 1.02
CCDC7-203ENST00000362006 EIF6P56537 245 aaKnown RBP21.43■■□□□ 1.02
CCDC7-203ENST00000362006 SH3RF3Q8TEJ3 882 aaPredicted RBP21.43■■□□□ 1.02
CCDC7-203ENST00000362006 SDR42E1Q8WUS8 393 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 GMLQ99445 158 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 CYP46A1Q9Y6A2 500 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 DICER1Q9UPY3 1922 aaKnown RBP21.43■■□□□ 1.02
CCDC7-203ENST00000362006 FZD9O00144 591 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 USP5P45974 858 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 SCNN1DP51172 638 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 NEK1Q96PY6 1258 aa21.43■■□□□ 1.02
CCDC7-203ENST00000362006 CASTP20810 708 aaKnown RBP21.42■■□□□ 1.02
CCDC7-203ENST00000362006 MCM2P49736 904 aa21.42■■□□□ 1.02
CCDC7-203ENST00000362006 ADCK5Q3MIX3 580 aa21.42■■□□□ 1.02
CCDC7-203ENST00000362006 HSCBQ8IWL3 235 aa21.42■■□□□ 1.02
CCDC7-203ENST00000362006 OGFOD1Q8N543 542 aa21.42■■□□□ 1.02
CCDC7-203ENST00000362006 DCP1AQ9NPI6 582 aaPredicted RBP21.42■■□□□ 1.02
CCDC7-203ENST00000362006 DAXXQ9UER7 740 aaPredicted RBP21.42■■□□□ 1.02
CCDC7-203ENST00000362006 RPS12P25398 132 aaKnown RBP21.41■■□□□ 1.02
CCDC7-203ENST00000362006 BLOC1S2Q6QNY1 142 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 RUFY3Q7L099 469 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 TEX11Q8IYF3 940 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 E7EWF7 191 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 RHBDL3P58872 404 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 SBK1Q52WX2 424 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 ARPP21Q9UBL0 812 aaPredicted RBP21.41■■□□□ 1.02
CCDC7-203ENST00000362006 ANAPC4Q9UJX5 808 aa21.41■■□□□ 1.02
CCDC7-203ENST00000362006 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
CCDC7-203ENST00000362006 PRELPP51888 382 aa21.4■■□□□ 1.02
CCDC7-203ENST00000362006 RBM5P52756 815 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCDC7-203ENST00000362006 HAND2P61296 217 aa21.4■■□□□ 1.02
CCDC7-203ENST00000362006 APOBEC3HQ6NTF7 200 aaKnown RBP21.4■■□□□ 1.02
CCDC7-203ENST00000362006 UPF3BQ9BZI7 483 aaKnown RBP21.4■■□□□ 1.02
CCDC7-203ENST00000362006 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
CCDC7-203ENST00000362006 SBF1O95248 1867 aa21.4■■□□□ 1.02
CCDC7-203ENST00000362006 USP17L8P0C7I0 530 aa21.39■■□□□ 1.01
CCDC7-203ENST00000362006 TRDNQ13061 729 aa21.39■■□□□ 1.01
CCDC7-203ENST00000362006 RNF41Q9H4P4 317 aaPredicted RBP21.39■■□□□ 1.01
CCDC7-203ENST00000362006 USP40Q9NVE5 1235 aa21.39■■□□□ 1.01
CCDC7-203ENST00000362006 TAF6LQ9Y6J9 622 aa21.39■■□□□ 1.01
CCDC7-203ENST00000362006 BAZ2AQ9UIF9 1905 aaKnown RBP21.38■■□□□ 1.01
CCDC7-203ENST00000362006 PCP11498 1178 aaKnown RBP21.38■■□□□ 1.01
CCDC7-203ENST00000362006 YBX3P16989 372 aaKnown RBP eCLIP21.38■■□□□ 1.01
CCDC7-203ENST00000362006 PPARAQ07869 468 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 CTR9Q6PD62 1173 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 NCOA7Q8NI08 942 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 TGFBRAP1Q8WUH2 860 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 ALDH8A1Q9H2A2 487 aaPredicted RBP21.38■■□□□ 1.01
CCDC7-203ENST00000362006 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 FOCADQ5VW36 1801 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 RPS6KB1P23443 525 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 STOX1Q6ZVD7 989 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 CNNM2Q9H8M5 875 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 PDRG1Q9NUG6 133 aa21.38■■□□□ 1.01
CCDC7-203ENST00000362006 USP17L12C9JPN9 530 aa21.37■■□□□ 1.01
CCDC7-203ENST00000362006 USP17L21D6R901 530 aa21.37■■□□□ 1.01
CCDC7-203ENST00000362006 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
CCDC7-203ENST00000362006 CFAP100Q494V2 611 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms