RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
SMC5-201ENST00000361138 TMEM132AQ24JP5 1023 aa15.73■□□□□ 0.11
SMC5-201ENST00000361138 C8orf74Q6P047 294 aa15.73■□□□□ 0.11
SMC5-201ENST00000361138 UBLCP1Q8WVY7 318 aaPredicted RBP15.73■□□□□ 0.11
SMC5-201ENST00000361138 CLEC17AQ6ZS10 378 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 MCM7P33993 719 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 NCBP1Q09161 790 aaKnown RBP15.72■□□□□ 0.11
SMC5-201ENST00000361138 PHLPP2Q6ZVD8 1323 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 HPDP32754 393 aaPredicted RBP15.72■□□□□ 0.11
SMC5-201ENST00000361138 TMEM87AQ8NBN3 555 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 GPTP24298 496 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 MAP2K2P36507 400 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 SPAG5Q96R06 1193 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 A0A1W2PRG0 241 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 SPTY2D1Q68D10 685 aaPredicted RBP15.72■□□□□ 0.11
SMC5-201ENST00000361138 FAM71BQ8TC56 605 aa15.72■□□□□ 0.11
SMC5-201ENST00000361138 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
SMC5-201ENST00000361138 LONRF3Q496Y0 759 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 IFT20Q8IY31 132 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 MYCBPQ99417 103 aaPredicted RBP15.71■□□□□ 0.11
SMC5-201ENST00000361138 SBNO2Q9Y2G9 1366 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 PFKFB1P16118 471 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 PPFIA1Q13136 1202 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 CALM1P0DP23 149 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 CALM2P0DP24 149 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 CALM3P0DP25 149 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
SMC5-201ENST00000361138 MPHOSPH10O00566 681 aaKnown RBP15.71■□□□□ 0.11
SMC5-201ENST00000361138 CCDC172P0C7W6 258 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 CCDC6Q16204 474 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 USP28Q96RU2 1077 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 SWAP70Q9UH65 585 aa15.71■□□□□ 0.11
SMC5-201ENST00000361138 TERF2Q15554 542 aa15.71■□□□□ 0.1
SMC5-201ENST00000361138 PDE11AQ9HCR9 933 aa15.71■□□□□ 0.1
SMC5-201ENST00000361138 TRPM2O94759 1503 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 KRT13P13646 458 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 CLNS1AP54105 237 aaKnown RBP15.7■□□□□ 0.1
SMC5-201ENST00000361138 C6orf163Q5TEZ5 329 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 TBC1D5Q92609 795 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 VWA3AA6NCI4 1184 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 ARID5AQ03989 594 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 SSH3Q8TE77 659 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 TTC14Q96N46 770 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 PAK1Q13153 545 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 SLC39A6Q13433 755 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
SMC5-201ENST00000361138 WWC3Q9ULE0 1092 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 PRPHP41219 470 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
SMC5-201ENST00000361138 CCDC51Q96ER9 411 aa15.7■□□□□ 0.1
SMC5-201ENST00000361138 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 DESI2Q9BSY9 194 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 GNAT2P19087 354 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 CETN1Q12798 172 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 TRMT44Q8IYL2 757 aaKnown RBP15.69■□□□□ 0.1
SMC5-201ENST00000361138 PAIP2Q9BPZ3 127 aaKnown RBP15.69■□□□□ 0.1
SMC5-201ENST00000361138 SLF1Q9BQI6 1058 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 MED4Q9NPJ6 270 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 HEATR3Q7Z4Q2 680 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 NOC4LQ9BVI4 516 aaKnown RBP15.69■□□□□ 0.1
SMC5-201ENST00000361138 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 PFKFB2O60825 505 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 CLCN6P51797 869 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 ZNF174Q15697 407 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 FBXO38Q6PIJ6 1188 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 DDX12PQ92771 950 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 TMEM87BQ96K49 555 aa15.69■□□□□ 0.1
SMC5-201ENST00000361138 SMIM23A6NLE4 172 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 BUB1BO60566 1050 aaPredicted RBP15.68■□□□□ 0.1
SMC5-201ENST00000361138 RPGRIP1Q96KN7 1286 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 NUP58Q9BVL2 599 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 DDX41Q9UJV9 622 aaKnown RBP15.68■□□□□ 0.1
SMC5-201ENST00000361138 GOLGA8KD6RF30 607 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 CYP7A1P22680 504 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 SND1Q7KZF4 910 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMC5-201ENST00000361138 VAT1LQ9HCJ6 419 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 CHD1O14646 1710 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 DEXIO95424 95 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 RBM28Q9NW13 759 aaKnown RBP15.68■□□□□ 0.1
SMC5-201ENST00000361138 CALML3P27482 149 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 NDUFA8P51970 172 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 FBF1Q8TES7 1133 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 PCDHA7Q9UN72 937 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 E7EWF7 191 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 HOXB7P09629 217 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 SUCLG2Q96I99 432 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
SMC5-201ENST00000361138 HOOK3Q86VS8 718 aa15.67■□□□□ 0.1
SMC5-201ENST00000361138 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
SMC5-201ENST00000361138 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
SMC5-201ENST00000361138 HOXC9P31274 260 aa15.67■□□□□ 0.1
SMC5-201ENST00000361138 GNGT1P63211 74 aa15.67■□□□□ 0.1
SMC5-201ENST00000361138 LACTBP83111 547 aaPredicted RBP15.67■□□□□ 0.1
SMC5-201ENST00000361138 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms