RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 NCOA7Q8NI08 942 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 HOOK1Q9UJC3 728 aaKnown RBP11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 CCDC151A5D8V7 595 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 DHX58Q96C10 678 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 RASSF4Q9H2L5 321 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 ARHGAP23Q9P227 1491 aa11.4□□□□□ -0.58
TRAPPC2-201ENST00000359680 IL15P40933 162 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 ADKP55263 362 aaKnown RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 TBX2Q13207 712 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 KARSQ15046 597 aaKnown RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 BRD3Q15059 726 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 RESP18Q5W5W9 173 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 MB21D2Q8IYB1 491 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 OSBP2Q969R2 916 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 INTS13Q9NVM9 706 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 PSD3Q9NYI0 1048 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 ADAM21Q9UKJ8 722 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 GYS2P54840 703 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 FKBP4Q02790 459 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 ATG9AQ7Z3C6 839 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 TC2NQ8N9U0 490 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 SLC52A2Q9HAB3 445 aa11.39□□□□□ -0.59
TRAPPC2-201ENST00000359680 CUTAO60888 179 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 CDKL5O76039 1030 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 CHMP4BP1P59074 171 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 PDE4CQ08493 712 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 CLIC6Q96NY7 704 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 DESI2Q9BSY9 194 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 KCNH3Q9ULD8 1083 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 SPEF2Q9C093 1822 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 FAM237AA0A1B0GTK4 181 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 FGAP02671 866 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 GCP02774 474 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 CCDC175P0C221 793 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 LONRF3Q496Y0 759 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 KRT40Q6A162 431 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 LEKR1Q6ZMV7 388 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 RGS22Q8NE09 1264 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 AIFM3Q96NN9 605 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 ZSWIM4Q9H7M6 989 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 NFE2L3Q9Y4A8 694 aa11.38□□□□□ -0.59
TRAPPC2-201ENST00000359680 A0A1B0GUL7 405 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 MYO1CO00159 1063 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ZNF213O14771 459 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 CASP7P55210 303 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 PDE4BQ07343 736 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 TRDNQ13061 729 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 TRIM29Q14134 588 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 PTPAQ15257 358 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 H3BQF6 201 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ERLIN1O75477 346 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ANTXR2P58335 489 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 SLIT3O75094 1523 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 MAP2K7O14733 419 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 CDC27P30260 824 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 ACTN2P35609 894 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 FOXO4P98177 505 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 MCM6Q14566 821 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 HDXQ7Z353 690 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 CEP112Q8N8E3 955 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 RAI14Q9P0K7 980 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 VPS18Q9P253 973 aa11.37□□□□□ -0.59
TRAPPC2-201ENST00000359680 C4AP0C0L4 1744 aa11.36□□□□□ -0.59
TRAPPC2-201ENST00000359680 C4BP0C0L5 1744 aa11.36□□□□□ -0.59
TRAPPC2-201ENST00000359680 WDR19Q8NEZ3 1342 aa11.36□□□□□ -0.59
TRAPPC2-201ENST00000359680 EYA2O00167 538 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms