RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 IGSF22Q8N9C0 903 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 BPIFA3Q9BQP9 254 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 GOLGA6AQ9NYA3 693 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 GOLGA8BA8MQT2 603 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 PCMTD1Q96MG8 357 aaPredicted RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 CLIC6Q96NY7 704 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 NAPGQ99747 312 aaPredicted RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 GUCA1BQ9UMX6 200 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ZEB2O60315 1214 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ATP7BP35670 1465 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
CNOT3-202ENST00000358389 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 EYA1Q99502 592 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
CNOT3-202ENST00000358389 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 BTBD11A6QL63 1104 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 KIFC2Q96AC6 838 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 DEPDC5O75140 1603 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 EDC4Q6P2E9 1401 aaKnown RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 CTDNEP1O95476 244 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 NF2P35240 595 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 MCMDC2Q4G0Z9 681 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 SMARCC2Q8TAQ2 1214 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 CEP89Q96ST8 783 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 CRB1P82279 1406 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 EXOC5O00471 708 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 GNGT1P63211 74 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
CNOT3-202ENST00000358389 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
CNOT3-202ENST00000358389 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
CNOT3-202ENST00000358389 CDR1P51861 262 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
CNOT3-202ENST00000358389 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 ENC1O14682 589 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 SASH1O94885 1247 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 YEATS4O95619 227 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 CMA1P23946 247 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 CCDC70Q6NSX1 233 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 MMP14P50281 582 aa12.99□□□□□ -0.33
CNOT3-202ENST00000358389 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
CNOT3-202ENST00000358389 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
CNOT3-202ENST00000358389 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 EHD4Q9H223 541 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 SAMSN1Q9NSI8 373 aaKnown RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 CCDC196A0A1B0GTZ2 297 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 GOLIM4O00461 696 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.332e-7■■■■■ 32.5
CNOT3-202ENST00000358389 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 DONSONQ9NYP3 566 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 GGCXP38435 758 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 NEBLO76041 1014 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-202ENST00000358389 KAT2BQ92831 832 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
CNOT3-202ENST00000358389 ERICH2A1L162 156 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 RXRAP19793 462 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 CAPS2Q9BXY5 557 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
CNOT3-202ENST00000358389 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 FOXN1O15353 648 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 C19orf44Q9H6X5 657 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms