RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
USP6-202ENST00000357482 FMNL3Q8IVF7 1028 aa17.02■□□□□ 0.32
USP6-202ENST00000357482 SPC24Q8NBT2 197 aa17.02■□□□□ 0.32
USP6-202ENST00000357482 RBM17Q96I25 401 aaKnown RBP17.02■□□□□ 0.32
USP6-202ENST00000357482 NLRP3Q96P20 1036 aa17.02■□□□□ 0.32
USP6-202ENST00000357482 CTAGE5O15320 804 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.31
USP6-202ENST00000357482 CCDC192P0DO97 292 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.31
USP6-202ENST00000357482 TCIRG1Q13488 830 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 PPP2R5AQ15172 486 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 NLRP10Q86W26 655 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 RTKN2Q8IZC4 609 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.31
USP6-202ENST00000357482 PAIP2Q9BPZ3 127 aaKnown RBP17.02■□□□□ 0.31
USP6-202ENST00000357482 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.31
USP6-202ENST00000357482 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
USP6-202ENST00000357482 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
USP6-202ENST00000357482 REXO1L1PQ8IX06 675 aa17.01■□□□□ 0.31
USP6-202ENST00000357482 ZGPATQ8N5A5 531 aaKnown RBP17.01■□□□□ 0.31
USP6-202ENST00000357482 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
USP6-202ENST00000357482 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
USP6-202ENST00000357482 ANKRD36CQ5JPF3 1778 aa17.01■□□□□ 0.31
USP6-202ENST00000357482 NEFHP12036 1026 aa17■□□□□ 0.31
USP6-202ENST00000357482 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
USP6-202ENST00000357482 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
USP6-202ENST00000357482 FAM200AQ8TCP9 573 aa17■□□□□ 0.31
USP6-202ENST00000357482 USP26Q9BXU7 913 aa17■□□□□ 0.31
USP6-202ENST00000357482 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
USP6-202ENST00000357482 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
USP6-202ENST00000357482 MPHOSPH10O00566 681 aaKnown RBP17■□□□□ 0.31
USP6-202ENST00000357482 CUL4AQ13619 759 aa17■□□□□ 0.31
USP6-202ENST00000357482 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
USP6-202ENST00000357482 USP48Q86UV5 1035 aa17■□□□□ 0.31
USP6-202ENST00000357482 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
USP6-202ENST00000357482 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
USP6-202ENST00000357482 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
USP6-202ENST00000357482 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
USP6-202ENST00000357482 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
USP6-202ENST00000357482 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
USP6-202ENST00000357482 ADAM21Q9UKJ8 722 aa16.99■□□□□ 0.31
USP6-202ENST00000357482 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
USP6-202ENST00000357482 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
USP6-202ENST00000357482 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 TADA2BQ86TJ2 420 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 PSMD1Q99460 953 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 TMCO5BA8MYB1 307 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 AP5Z1O43299 807 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 GIMAP7Q8NHV1 300 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 ARHGAP45Q92619 1136 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 CRAMP1Q96RY5 1269 aa16.98■□□□□ 0.31
USP6-202ENST00000357482 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
USP6-202ENST00000357482 LMAN1P49257 510 aa16.97■□□□□ 0.31
USP6-202ENST00000357482 DHX8Q14562 1220 aaKnown RBP16.97■□□□□ 0.31
USP6-202ENST00000357482 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
USP6-202ENST00000357482 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
USP6-202ENST00000357482 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
USP6-202ENST00000357482 CALR3Q96L12 384 aaKnown RBP16.97■□□□□ 0.31
USP6-202ENST00000357482 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
USP6-202ENST00000357482 IPO7O95373 1038 aaKnown RBP16.96■□□□□ 0.31
USP6-202ENST00000357482 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
USP6-202ENST00000357482 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
USP6-202ENST00000357482 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.31
USP6-202ENST00000357482 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
USP6-202ENST00000357482 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
USP6-202ENST00000357482 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
USP6-202ENST00000357482 DDNO94850 711 aaPredicted RBP16.96■□□□□ 0.3
USP6-202ENST00000357482 CAVIN2O95810 425 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.3
USP6-202ENST00000357482 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.3
USP6-202ENST00000357482 ARHGAP29Q52LW3 1261 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 UBXN4Q92575 508 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 MIEF2Q96C03 454 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 FAM212AQ96EL1 285 aa16.96■□□□□ 0.3
USP6-202ENST00000357482 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 ZNF75DP51815 510 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 MNAT1P51948 309 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 FSTL1Q12841 308 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 ERCC6LQ2NKX8 1250 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 SMC1BQ8NDV3 1235 aa16.95■□□□□ 0.3
USP6-202ENST00000357482 GADD45BO75293 160 aaPredicted RBP16.94■□□□□ 0.3
USP6-202ENST00000357482 APLP1P51693 650 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
USP6-202ENST00000357482 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
USP6-202ENST00000357482 ORC3Q9UBD5 711 aaPredicted RBP16.94■□□□□ 0.3
USP6-202ENST00000357482 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP6-202ENST00000357482 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 ABCC4O15439 1325 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms