RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
RTFDC1-202ENST00000357348 CNKSR1Q969H4 720 aa14.87□□□□□ -0.03
RTFDC1-202ENST00000357348 GNL3LQ9NVN8 582 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-202ENST00000357348 COL1A1P02452 1464 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-202ENST00000357348 CASTP20810 708 aaKnown RBP14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 KCNA3P22001 575 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 ATP2B4P23634 1241 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 ZNF512BQ96KM6 892 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 MYH7P12883 1935 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 PTGER2P43116 358 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 SYCP1Q15431 976 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 FBXO33Q7Z6M2 555 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 CCDC83Q8IWF9 413 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 PDRG1Q9NUG6 133 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 IRS2Q9Y4H2 1338 aa14.86□□□□□ -0.03
RTFDC1-202ENST00000357348 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 NECTIN1Q15223 517 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 RBM43Q6ZSC3 357 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 TTLL6Q8N841 843 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 SGIP1Q9BQI5 828 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 PPP4R3BQ5MIZ7 849 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 SLC9C2Q5TAH2 1124 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 LRP2BPQ9P2M1 347 aa14.85□□□□□ -0.03
RTFDC1-202ENST00000357348 PTH1RQ03431 593 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 DOK7Q18PE1 504 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 ADCK5Q3MIX3 580 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 ALDH8A1Q9H2A2 487 aaPredicted RBP14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 CYP46A1Q9Y6A2 500 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 MRVI1Q9Y6F6 885 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 CHD4Q14839 1912 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 DLEC1Q9Y238 1755 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 HIP1O00291 1037 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 RNF113AO15541 343 aaKnown RBP14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 CPA1P15085 419 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 ME3Q16798 604 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 ZNF804AQ7Z570 1209 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 LARP6Q9BRS8 491 aaKnown RBP14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 DUOX1Q9NRD9 1551 aa14.84□□□□□ -0.03
RTFDC1-202ENST00000357348 TTF1Q15361 905 aaPredicted RBP14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 PDCL2Q8N4E4 241 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 MAGEB6Q8N7X4 407 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 FBXW7Q969H0 707 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 ARID3AQ99856 593 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 ZC3H12CQ9C0D7 883 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 PRDM10Q9NQV6 1147 aa14.83□□□□□ -0.04
RTFDC1-202ENST00000357348 KRT85P78386 507 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 TYRO3Q06418 890 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 NLGN2Q8NFZ4 835 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 OSBP2Q969R2 916 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 CD209Q9NNX6 404 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 RAI14Q9P0K7 980 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 DENND2AQ9ULE3 1009 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 TCHHQ07283 1943 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 G3V3G9 751 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 M0R2C6 588 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 DCAF8Q5TAQ9 597 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 C7orf43Q8WVR3 580 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 DBNDD1Q9H9R9 158 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 ZNF532Q9HCE3 1301 aa14.82□□□□□ -0.04
RTFDC1-202ENST00000357348 MCMDC2Q4G0Z9 681 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 PLA2G4DQ86XP0 818 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 DOCK2Q92608 1830 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 KIF20AO95235 890 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 PDE6AP16499 860 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 PRDX5P30044 214 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 ADD2P35612 726 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 TGFB2P61812 414 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 CBX1P83916 185 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 FEZ1Q99689 392 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 KIAA1551Q9HCM1 1747 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 TPCN1Q9ULQ1 816 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 MAST3O60307 1309 aa14.81□□□□□ -0.04
RTFDC1-202ENST00000357348 MED23Q9ULK4 1368 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 LIG1P18858 919 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 PDCP20941 246 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 MAP3K12Q12852 859 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 AOC3Q16853 763 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 ZMYM1Q5SVZ6 1142 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 DDX19AQ9NUU7 478 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 BCS1LQ9Y276 419 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 PTGS1P23219 599 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 GRIK5Q16478 980 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms