RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ZNF18P17022 549 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 CTR9Q6PD62 1173 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 YY1AP1Q9H869 796 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 FANCLQ9NW38 375 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 PPFIA3O75145 1194 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 PTPAQ15257 358 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 ATF3P18847 181 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 BMP6P22004 513 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 FOXP4Q8IVH2 680 aaPredicted RBP13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 C10orf67Q8IYJ2 551 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 ARFGEF2Q9Y6D5 1785 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 CUTAO60888 179 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 SYKP43405 635 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 SRGAP1Q7Z6B7 1085 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 IVLP07476 585 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 LMAN1P49257 510 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 RESP18Q5W5W9 173 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 ABTB2Q8N961 1025 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 L1RE1Q9UN81 338 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
SMARCAL1-201ENST00000357276 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 MAP3K14Q99558 947 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 MAST3O60307 1309 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 PDE4BQ07343 736 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 PNOCQ13519 176 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
SMARCAL1-201ENST00000357276 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.19
SMARCAL1-201ENST00000357276 FOXP2O15409 715 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 CDC27P30260 824 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 TUBB4BP68371 445 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 MRPL44Q9H9J2 332 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 HDXQ7Z353 690 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 CHMP4BP1P59074 171 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 NT5DC1Q5TFE4 455 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 GJB4Q9NTQ9 266 aa13.89□□□□□ -0.19
SMARCAL1-201ENST00000357276 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 TUBB2AQ13885 445 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 PTPN21Q16825 1174 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 PNKPQ96T60 521 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 TUBB2BQ9BVA1 445 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 WDR19Q8NEZ3 1342 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 CASP7P55210 303 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 GPR108Q9NPR9 543 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 MAGEA9P43362 315 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 AIMP1Q12904 312 aaKnown RBP13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 PANX2Q96RD6 677 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
SMARCAL1-201ENST00000357276 MARCKSP29966 332 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 NR1I3Q14994 352 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 CEP112Q8N8E3 955 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 COL18A1P39060 1754 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 ADKP55263 362 aaKnown RBP13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 ANTXR2P58335 489 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 LONRF3Q496Y0 759 aa13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 ENOX1Q8TC92 643 aaKnown RBP13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-201ENST00000357276 GOLIM4O00461 696 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 RNF113AO15541 343 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 SARSP49591 514 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 ICE2Q659A1 982 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 LEKR1Q6ZMV7 388 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 MED15Q96RN5 788 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 VPS18Q9P253 973 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 M0R2C6 588 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms