RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
TRIM13-201ENST00000356017 TCRBV5S4A2TA0A5A2 114 aa18.76■□□□□ 0.59
TRIM13-201ENST00000356017 PPP4CP60510 307 aa18.76■□□□□ 0.59
TRIM13-201ENST00000356017 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
TRIM13-201ENST00000356017 TDRD3Q9H7E2 651 aaKnown RBP18.76■□□□□ 0.59
TRIM13-201ENST00000356017 HIP1O00291 1037 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 SDSP20132 328 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 BMP2KLQ5H9B9 411 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 ANGEL2Q5VTE6 544 aaKnown RBP18.75■□□□□ 0.59
TRIM13-201ENST00000356017 ADGRA1Q86SQ6 560 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 GGA3Q9NZ52 723 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 MAST2Q6P0Q8 1798 aa18.75■□□□□ 0.59
TRIM13-201ENST00000356017 TOMM70O94826 608 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 APOBEC3FQ8IUX4 373 aaKnown RBP18.74■□□□□ 0.59
TRIM13-201ENST00000356017 APPBP2Q92624 585 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM13-201ENST00000356017 ZNF70Q9UC06 446 aaPredicted RBP18.74■□□□□ 0.59
TRIM13-201ENST00000356017 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 FKBP1CQ5VVH2 108 aa18.74■□□□□ 0.59
TRIM13-201ENST00000356017 CLRN2A0PK11 232 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 CDC37L1Q7L3B6 337 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 SULF1Q8IWU6 871 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 MIGA1Q8NAN2 632 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 VEZTQ9HBM0 779 aa18.73■□□□□ 0.59
TRIM13-201ENST00000356017 ASTN2O75129 1339 aaPredicted RBP18.72■□□□□ 0.59
TRIM13-201ENST00000356017 MYH2Q9UKX2 1941 aa18.72■□□□□ 0.59
TRIM13-201ENST00000356017 TNNI2P48788 182 aa18.72■□□□□ 0.59
TRIM13-201ENST00000356017 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
TRIM13-201ENST00000356017 RHBDL3P58872 404 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 ZMYM1Q5SVZ6 1142 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 RBM46Q8TBY0 533 aaKnown RBP18.71■□□□□ 0.59
TRIM13-201ENST00000356017 RIOK1Q9BRS2 568 aaKnown RBP18.71■□□□□ 0.59
TRIM13-201ENST00000356017 IDI2Q9BXS1 227 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 HELLSQ9NRZ9 838 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 DIAPH3Q9NSV4 1193 aa18.71■□□□□ 0.59
TRIM13-201ENST00000356017 MYO5AQ9Y4I1 1855 aaKnown RBP18.71■□□□□ 0.59
TRIM13-201ENST00000356017 SLFNL1Q499Z3 407 aa18.71■□□□□ 0.58
TRIM13-201ENST00000356017 MAP1SQ66K74 1059 aaPredicted RBP18.71■□□□□ 0.58
TRIM13-201ENST00000356017 FAM83AQ86UY5 434 aa18.71■□□□□ 0.58
TRIM13-201ENST00000356017 OSBP2Q969R2 916 aa18.71■□□□□ 0.58
TRIM13-201ENST00000356017 PUS7LQ9H0K6 701 aaKnown RBP18.71■□□□□ 0.58
TRIM13-201ENST00000356017 PPP2R3BQ9Y5P8 575 aa18.71■□□□□ 0.58
TRIM13-201ENST00000356017 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
TRIM13-201ENST00000356017 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
TRIM13-201ENST00000356017 CHGBP05060 677 aa18.7■□□□□ 0.58
TRIM13-201ENST00000356017 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
TRIM13-201ENST00000356017 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
TRIM13-201ENST00000356017 SH3RF3Q8TEJ3 882 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-201ENST00000356017 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
TRIM13-201ENST00000356017 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
TRIM13-201ENST00000356017 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-201ENST00000356017 MBD4O95243 580 aa18.69■□□□□ 0.58
TRIM13-201ENST00000356017 CACNB3P54284 484 aa18.69■□□□□ 0.58
TRIM13-201ENST00000356017 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
TRIM13-201ENST00000356017 ENTPD3O75355 529 aa18.68■□□□□ 0.58
TRIM13-201ENST00000356017 GNAT2P19087 354 aa18.68■□□□□ 0.58
TRIM13-201ENST00000356017 FSTL1Q12841 308 aa18.68■□□□□ 0.58
TRIM13-201ENST00000356017 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
TRIM13-201ENST00000356017 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
TRIM13-201ENST00000356017 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
TRIM13-201ENST00000356017 RASA3Q14644 834 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 USP48Q86UV5 1035 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 LCORLQ8N3X6 602 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 FAM151AQ8WW52 585 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 RUFY2Q8WXA3 655 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 STRBPQ96SI9 672 aaKnown RBP18.67■□□□□ 0.58
TRIM13-201ENST00000356017 MYH7P12883 1935 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 GPAA1O43292 621 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 USP5P45974 858 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 NFIAQ12857 509 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 NMIQ13287 307 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-201ENST00000356017 CASC1Q6TDU7 716 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
TRIM13-201ENST00000356017 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 FAM227BQ96M60 508 aa18.67■□□□□ 0.58
TRIM13-201ENST00000356017 GLIS2Q9BZE0 524 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-201ENST00000356017 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
TRIM13-201ENST00000356017 CHMLP26374 656 aa18.66■□□□□ 0.58
TRIM13-201ENST00000356017 PICALMQ13492 652 aa18.66■□□□□ 0.58
TRIM13-201ENST00000356017 DDRGK1Q96HY6 314 aa18.66■□□□□ 0.58
TRIM13-201ENST00000356017 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
TRIM13-201ENST00000356017 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
TRIM13-201ENST00000356017 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 ADM5C9JUS6 153 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 M0R2C6 588 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 ITGBL1O95965 494 aaPredicted RBP18.65■□□□□ 0.58
TRIM13-201ENST00000356017 TCP10Q12799 353 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
TRIM13-201ENST00000356017 SLC4A4Q9Y6R1 1079 aa18.65■□□□□ 0.58
TRIM13-201ENST00000356017 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms