RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ZNF213O14771 459 aa15.83■□□□□ 0.12
UBA3-201ENST00000349511 STYK1Q6J9G0 422 aa15.83■□□□□ 0.12
UBA3-201ENST00000349511 C15orf52Q6ZUT6 534 aaKnown RBP15.83■□□□□ 0.12
UBA3-201ENST00000349511 IFNL3Q8IZI9 196 aa15.83■□□□□ 0.12
UBA3-201ENST00000349511 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
UBA3-201ENST00000349511 PPP1R1BQ9UD71 204 aaPredicted RBP15.83■□□□□ 0.12
UBA3-201ENST00000349511 CTNNA3Q9UI47 895 aa15.83■□□□□ 0.12
UBA3-201ENST00000349511 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
UBA3-201ENST00000349511 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 MSNP26038 577 aaKnown RBP15.82■□□□□ 0.12
UBA3-201ENST00000349511 DIXDC1Q155Q3 683 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 DZIP1Q86YF9 867 aaKnown RBP15.82■□□□□ 0.12
UBA3-201ENST00000349511 CHD4Q14839 1912 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 LTBP1Q14766 1721 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 C21orf2O43822 256 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 LDHBP07195 334 aaKnown RBP15.82■□□□□ 0.12
UBA3-201ENST00000349511 IL1R1P14778 569 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 GTF2IP78347 998 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
UBA3-201ENST00000349511 NAPBQ9H115 298 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 LIMCH1Q9UPQ0 1083 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
UBA3-201ENST00000349511 TOB2Q14106 344 aaPredicted RBP15.81■□□□□ 0.12
UBA3-201ENST00000349511 HS1BP3Q53T59 392 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 Q6ZUG5 572 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 NKX2-3Q8TAU0 364 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 CNKSR1Q969H4 720 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
UBA3-201ENST00000349511 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
UBA3-201ENST00000349511 G3V3G9 751 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 SMIM22K7EJ46 135 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 TDO2P48775 406 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 STK3Q13188 491 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 DCAF8Q5TAQ9 597 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 NECAB1Q8N987 351 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 MXD3Q9BW11 206 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 NBPF3Q9H094 633 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 DBNDD1Q9H9R9 158 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 KCNQ5Q9NR82 932 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
UBA3-201ENST00000349511 DPEP1P16444 411 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 FGD1P98174 961 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 ME3Q16798 604 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 MFSD14BQ5SR56 506 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 TBC1D10CQ8IV04 446 aa15.8■□□□□ 0.12
UBA3-201ENST00000349511 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
UBA3-201ENST00000349511 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
UBA3-201ENST00000349511 F8W031 263 aaPredicted RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 SLC4A8Q2Y0W8 1093 aa15.79■□□□□ 0.12
UBA3-201ENST00000349511 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 SPTY2D1Q68D10 685 aaPredicted RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 BRF1Q92994 677 aa15.79■□□□□ 0.12
UBA3-201ENST00000349511 GPHNQ9NQX3 736 aaPredicted RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 WDR33Q9C0J8 1336 aaKnown RBP15.79■□□□□ 0.12
UBA3-201ENST00000349511 C10orf71Q711Q0 1435 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 MINDY4BA8MYZ0 360 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 GNAT2P19087 354 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 KCNA3P22001 575 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 DHX32Q7L7V1 743 aaKnown RBP15.78■□□□□ 0.12
UBA3-201ENST00000349511 C7orf43Q8WVR3 580 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 COA1Q9GZY4 146 aa15.78■□□□□ 0.12
UBA3-201ENST00000349511 NOL7Q9UMY1 257 aaKnown RBP15.78■□□□□ 0.12
UBA3-201ENST00000349511 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.12
UBA3-201ENST00000349511 EVX2Q03828 476 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 NACAP1Q9BZK3 213 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 GDPD2Q9HCC8 539 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.12
UBA3-201ENST00000349511 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 SALL1Q9NSC2 1324 aa15.77■□□□□ 0.12
UBA3-201ENST00000349511 BAZ2AQ9UIF9 1905 aaKnown RBP15.77■□□□□ 0.12
UBA3-201ENST00000349511 OFD1O75665 1012 aa15.77■□□□□ 0.11
UBA3-201ENST00000349511 AOC3Q16853 763 aa15.77■□□□□ 0.11
UBA3-201ENST00000349511 TTLL6Q8N841 843 aa15.77■□□□□ 0.11
UBA3-201ENST00000349511 NAP1L2Q9ULW6 460 aaPredicted RBP15.77■□□□□ 0.11
UBA3-201ENST00000349511 TPM2P07951 284 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 EXOSC10Q01780 885 aaKnown RBP15.76■□□□□ 0.11
UBA3-201ENST00000349511 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 RALYLQ86SE5 291 aaKnown RBP15.76■□□□□ 0.11
UBA3-201ENST00000349511 USP48Q86UV5 1035 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 SYAP1Q96A49 352 aaPredicted RBP15.76■□□□□ 0.11
UBA3-201ENST00000349511 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 TOMM22Q9NS69 142 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 NEDD4P46934 1319 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 B4E1Z4 1266 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 HMGB1P09429 215 aaKnown RBP15.76■□□□□ 0.11
UBA3-201ENST00000349511 POLD1P28340 1107 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 APOBRQ0VD83 1088 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 ALX1Q15699 326 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 RRP12Q5JTH9 1297 aaKnown RBP15.76■□□□□ 0.11
UBA3-201ENST00000349511 NCOA7Q8NI08 942 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
UBA3-201ENST00000349511 EYA3Q99504 573 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms