RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CTDSPL2Q05D32 466 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 HSP90AA4PQ58FG1 418 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 CCDC102BQ68D86 513 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 FOXP4Q8IVH2 680 aaPredicted RBP20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 FAM217BQ9NTX9 383 aaPredicted RBP20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 ABCC6O95255 1503 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 GIGYF2Q6Y7W6 1299 aaKnown RBP20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 CCDC82Q8N4S0 544 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 PLA2G12BQ9BX93 195 aa20.95■□□□□ 0.94
PTP4A3-202ENST00000349124 PDE6AP16499 860 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 PTPAQ15257 358 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 NFXL1Q6ZNB6 911 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 LRRN4CLQ8ND94 238 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 IGDCC4Q8TDY8 1250 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 ZMYM6O95789 1325 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 NUP188Q5SRE5 1749 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 FOXN1O15353 648 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 FANCCQ00597 558 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 DMTNQ08495 405 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 VGLL2Q8N8G2 317 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 SLC4A9Q96Q91 983 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 FBXO3Q9UK99 471 aa20.94■□□□□ 0.94
PTP4A3-202ENST00000349124 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 CMTR1Q8N1G2 835 aaKnown RBP20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 TRMT112Q9UI30 125 aaKnown RBP20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 GUCY1A2P33402 732 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 CTSWP56202 376 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 GSDMDP57764 484 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 NTRK3Q16288 839 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 LONRF3Q496Y0 759 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 MAP3K15Q6ZN16 1313 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 LAMB4A4D0S4 1761 aa20.93■□□□□ 0.94
PTP4A3-202ENST00000349124 SYT10Q6XYQ8 523 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 STRBPQ96SI9 672 aaKnown RBP20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 MAP3K14Q99558 947 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 BPIFA3Q9BQP9 254 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 ZKSCAN3Q9BRR0 538 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 ZSWIM5Q9P217 1185 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 PDE8BO95263 885 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 ELF2Q15723 593 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 KMT5BQ4FZB7 885 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 PPP1R13BQ96KQ4 1090 aa20.92■□□□□ 0.94
PTP4A3-202ENST00000349124 ZBTB43O43298 467 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 PRKAB2O43741 272 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 GRIN1Q05586 938 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 KIF18AQ8NI77 898 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 LY9Q9HBG7 655 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 EPB41L4AQ9HCS5 686 aaPredicted RBP20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 TNS2Q63HR2 1409 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 TCRBV5S4A2TA0A5A2 114 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 TMEM67Q5HYA8 995 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 SLC26A6Q9BXS9 759 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 IMPACTQ9P2X3 320 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 COL5A2P05997 1499 aaPredicted RBP20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 STARD3NLO95772 234 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 SYCP1Q15431 976 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 AIDAQ96BJ3 306 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 ZBTB1Q9Y2K1 713 aa20.91■□□□□ 0.94
PTP4A3-202ENST00000349124 GOLGA8AA7E2F4 631 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 TMEM232C9JQI7 657 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 METTL16Q86W50 562 aaKnown RBP20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.9■□□□□ 0.943e-6■□□□□ 10.9
PTP4A3-202ENST00000349124 ARMT1Q9H993 441 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 KCNJ14Q9UNX9 436 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 UBN2Q6ZU65 1347 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 PDE4BQ07343 736 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 UBE3CQ15386 1083 aa20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 RRP12Q5JTH9 1297 aaKnown RBP20.9■□□□□ 0.94
PTP4A3-202ENST00000349124 BTBD18B2RXH4 712 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 BMP6P22004 513 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 MAGEB6Q8N7X4 407 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 TUBE1Q9UJT0 475 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 FANCLQ9NW38 375 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 PCDHA5Q9Y5H7 936 aa20.89■□□□□ 0.93
PTP4A3-202ENST00000349124 IFIT3O14879 490 aaKnown RBP20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 MBD4O95243 580 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 UBASH3AP57075 661 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 CGNQ9P2M7 1197 aaKnown RBP20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 PLEKHG2Q9H7P9 1386 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 STRCP1A6NGW2 1772 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 WDR19Q8NEZ3 1342 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 SMIM22K7EJ46 135 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 SERPINC1P01008 464 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 FBXO38Q6PIJ6 1188 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 IFNL3Q8IZI9 196 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 OGFRQ9NZT2 677 aa20.88■□□□□ 0.93
PTP4A3-202ENST00000349124 ATP2B1P20020 1258 aa20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 FEZ1Q99689 392 aa20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 TTF1Q15361 905 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms