RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 TPTE2Q6XPS3 522 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 PEAK1Q9H792 1746 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 ST7Q9NRC1 585 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 U3KPZ7 1027 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 ELP1O95163 1332 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 CTSWP56202 376 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 PI4K2BQ8TCG2 481 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 ACBD3Q9H3P7 528 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 MORC2Q9Y6X9 1032 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 NALCNQ8IZF0 1738 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 PDE8AO60658 829 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 ERLIN1O75477 346 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 EIF3JO75822 258 aaKnown RBP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 TDO2P48775 406 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 FAM193AP78312 1265 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 XPO4Q9C0E2 1151 aaKnown RBP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 COL5A2P05997 1499 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-202ENST00000348069 CPDO75976 1380 aa9.29□□□□□ -0.92
NLRP3-202ENST00000348069 PTPDC1A2A3K4 754 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 SLC5A1P13866 664 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 RXRAP19793 462 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 PHKA1P46020 1223 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 JAKMIP3Q5VZ66 844 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 CCDC12Q8WUD4 166 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 CDC5LQ99459 802 aaKnown RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 FTOQ9C0B1 505 aaKnown RBP eCLIP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 WTIPA6NIX2 430 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 IL6STP40189 918 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 POLA2Q14181 598 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 TMED8Q6PL24 325 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 ZNF589Q86UQ0 364 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 TTLL11Q8NHH1 800 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 FUCA2Q9BTY2 467 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 NCOA5Q9HCD5 579 aaKnown RBP9.28□□□□□ -0.92
NLRP3-202ENST00000348069 SPATA31A5Q5VU36 1347 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 SPATA31A7Q8IWB4 1347 aa9.28□□□□□ -0.92
NLRP3-202ENST00000348069 HMGB1P09429 215 aaKnown RBP9.27□□□□□ -0.92
NLRP3-202ENST00000348069 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.92
NLRP3-202ENST00000348069 CPLX3Q8WVH0 158 aa9.27□□□□□ -0.92
NLRP3-202ENST00000348069 DCCP43146 1447 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 H7C1W4 665 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 SLFN14P0C7P3 912 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
NLRP3-202ENST00000348069 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
NLRP3-202ENST00000348069 KIF4BQ2VIQ3 1234 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 TBC1D9BQ66K14 1250 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 PPFIBP1Q86W92 1011 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 CNBD1Q8NA66 436 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 USP28Q96RU2 1077 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.93
NLRP3-202ENST00000348069 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.27□□□□□ -0.93
NLRP3-202ENST00000348069 HNRNPH2P55795 449 aaKnown RBP9.27□□□□□ -0.93
NLRP3-202ENST00000348069 MAGEB6Q8N7X4 407 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 NUP133Q8WUM0 1156 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 PGBD1Q96JS3 809 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 RASSF4Q9H2L5 321 aa9.27□□□□□ -0.93
NLRP3-202ENST00000348069 PCCAP05165 728 aaPredicted RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 CLCN6P51797 869 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 ORC3Q9UBD5 711 aaPredicted RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 JCADQ9P266 1359 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 PHACTR2O75167 634 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 CAPN2P17655 700 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 OAS2P29728 719 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 ETF1P62495 437 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 SCARF1Q14162 830 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 COPRSQ9NQ92 184 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 SPTLC2O15270 562 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 SEC31AO94979 1220 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 FOXO4P98177 505 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 ATP2B2Q01814 1243 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 SAFBQ15424 915 aaKnown RBP eCLIP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 MAP4K1Q92918 833 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 ZKSCAN3Q9BRR0 538 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 YY1AP1Q9H869 796 aa9.26□□□□□ -0.93
NLRP3-202ENST00000348069 GNL3LQ9NVN8 582 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 GEMIN8Q9NWZ8 242 aaKnown RBP9.26□□□□□ -0.93
NLRP3-202ENST00000348069 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
NLRP3-202ENST00000348069 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
NLRP3-202ENST00000348069 TUBB4AP04350 444 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 CDC25BP30305 580 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 SYKP43405 635 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 NECTIN1Q15223 517 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 AXDND1Q5T1B0 1012 aaPredicted RBP9.25□□□□□ -0.93
NLRP3-202ENST00000348069 VPS18Q9P253 973 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 IMPACTQ9P2X3 320 aa9.25□□□□□ -0.93
NLRP3-202ENST00000348069 GOLGA8BA8MQT2 603 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms