RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 ARMT1Q9H993 441 aa15.2■□□□□ 0.02
CDK5RAP1-201ENST00000339269 FAM217BQ9NTX9 383 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ANGEL1Q9UNK9 670 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP1-201ENST00000339269 KIF3AQ9Y496 699 aa15.2■□□□□ 0.02
CDK5RAP1-201ENST00000339269 SCN7AQ01118 1682 aa15.2■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ATL3Q6DD88 541 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 IFNL3Q8IZI9 196 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 FBXO18Q8NFZ0 1043 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 BICD2Q8TD16 824 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 LRRC4BQ9NT99 713 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CASZ1Q86V15 1759 aa15.19■□□□□ 0.02
CDK5RAP1-201ENST00000339269 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CDC27P30260 824 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 APOA5Q6Q788 366 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CLEC4GQ6UXB4 293 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ADGRA1Q86SQ6 560 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 MPNDQ8N594 471 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 PNPLA7Q6ZV29 1317 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CTDSPL2Q05D32 466 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 NTRK3Q16288 839 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 TAF1P21675 1872 aa15.18■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 APPP05067 770 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ANO6Q4KMQ2 910 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 LUZP1Q86V48 1076 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 C8orf76Q96K31 380 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ECM29Q5VYK3 1845 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 RXRAP19793 462 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 KIF23Q02241 960 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ZNF396Q96N95 335 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 NID2Q14112 1375 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 TBC1D9BQ66K14 1250 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ZNF384Q8TF68 577 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ZNF830Q96NB3 372 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 PCDHA7Q9UN72 937 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
CDK5RAP1-201ENST00000339269 COL24A1Q17RW2 1714 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 DHX16O60231 1041 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 TRDNQ13061 729 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 R3HDM1Q15032 1099 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 MYSM1Q5VVJ2 828 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 ZSWIM5Q9P217 1185 aa15.15■□□□□ 0.02
CDK5RAP1-201ENST00000339269 RGL2O15211 777 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 GYG1P46976 350 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 METAP2P50579 478 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 TDRD7Q8NHU6 1098 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 MYL10Q9BUA6 226 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 IQSEC3Q9UPP2 1182 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 POLR3DP05423 398 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 AKNAD1Q5T1N1 836 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 NAPBQ9H115 298 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 DNAJC25Q9H1X3 360 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 MINPP1Q9UNW1 487 aa15.14■□□□□ 0.01
CDK5RAP1-201ENST00000339269 CHD4Q14839 1912 aa15.13■□□□□ 0.01
CDK5RAP1-201ENST00000339269 PTMAP06454 111 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP1-201ENST00000339269 KLRK1P26718 216 aa15.13■□□□□ 0.01
CDK5RAP1-201ENST00000339269 LIFRP42702 1097 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms