RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-201ENST00000338784 SPATA5Q8NB90 893 aa17.51■□□□□ 0.39
TNFSF13-201ENST00000338784 HELBQ8NG08 1087 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-201ENST00000338784 B4E1Z4 1266 aa17.5■□□□□ 0.39
TNFSF13-201ENST00000338784 SLC5A1P13866 664 aa17.5■□□□□ 0.39
TNFSF13-201ENST00000338784 ALX1Q15699 326 aa17.5■□□□□ 0.39
TNFSF13-201ENST00000338784 APOA5Q6Q788 366 aa17.5■□□□□ 0.39
TNFSF13-201ENST00000338784 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-201ENST00000338784 MAP3K12Q12852 859 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 ZRSR1Q15695 479 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 ERCC4Q92889 916 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 ALG1Q9BT22 464 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 KIAA1468Q9P260 1216 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 AKAP11Q9UKA4 1901 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 A0A087WWV3 80 aa17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-201ENST00000338784 ZBTB43O43298 467 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 NEMFO60524 1076 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 CMA1P23946 247 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 AOPEPQ8N6M6 819 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 MPHOSPH8Q99549 860 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 NEDD4P46934 1319 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 RXRAP19793 462 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 CDC27P30260 824 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 EIF5P55010 431 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 SUSD4Q5VX71 490 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 MICU3Q86XE3 530 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 IFNL3Q8IZI9 196 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 MAGEB6Q8N7X4 407 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 NAPBQ9H115 298 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 MYH7P12883 1935 aa17.48■□□□□ 0.39
TNFSF13-201ENST00000338784 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 ZNF202O95125 648 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 KRT40Q6A162 431 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 LRRC8AQ8IWT6 810 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
TNFSF13-201ENST00000338784 LRP5O75197 1615 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 MBD4O95243 580 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 SLC3A2P08195 630 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 LIFRP42702 1097 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 PHKBQ93100 1093 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 FBXW7Q969H0 707 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 BPIFA3Q9BQP9 254 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 PFKFB1P16118 471 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
TNFSF13-201ENST00000338784 RIOK3O14730 519 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 PPP6R2O75170 966 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 MYH3P11055 1940 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 TRIM29Q14134 588 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 NTRK3Q16288 839 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 DPCR1Q3MIW9 517 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 ZSWIM5Q9P217 1185 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
TNFSF13-201ENST00000338784 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 IFIT3O14879 490 aaKnown RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 MARCKSP29966 332 aaPredicted RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 CTDSPL2Q05D32 466 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 TSC1Q92574 1164 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 C16orf45Q96MC5 204 aaPredicted RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 CDCA7Q9BWT1 371 aaPredicted RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 KRT23Q9C075 422 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 INCENPQ9NQS7 918 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 SNAP23O00161 211 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 GNAT2P19087 354 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 NLRP12P59046 1061 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms