RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 TDRD3Q9H7E2 651 aaKnown RBP17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 MYO1BO43795 1136 aa17■□□□□ 0.31
APOBEC3B-202ENST00000335760 BAG3O95817 575 aa17■□□□□ 0.31
APOBEC3B-202ENST00000335760 BMP2KLQ5H9B9 411 aa17■□□□□ 0.31
APOBEC3B-202ENST00000335760 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
APOBEC3B-202ENST00000335760 USP40Q9NVE5 1235 aa17■□□□□ 0.31
APOBEC3B-202ENST00000335760 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
APOBEC3B-202ENST00000335760 RFX7Q2KHR2 1363 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 KIF3CO14782 793 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 POTEJP0CG39 1038 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 APPBP2Q92624 585 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
APOBEC3B-202ENST00000335760 MAGEB6P1A0A0J9YX57 407 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 PPP4CP60510 307 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 TICAM2Q86XR7 235 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
APOBEC3B-202ENST00000335760 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 PUS7LQ9H0K6 701 aaKnown RBP16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
APOBEC3B-202ENST00000335760 HIP1O00291 1037 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 PLCG2P16885 1265 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 CACNB3P54284 484 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 RHBDL3P58872 404 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 AIDAQ96BJ3 306 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 RIOK1Q9BRS2 568 aaKnown RBP16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
APOBEC3B-202ENST00000335760 TCP10L2B9ZVM9 353 aa16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 M0R2C6 588 aa16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 MBD4O95243 580 aa16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
APOBEC3B-202ENST00000335760 PITPNM2Q9BZ72 1349 aa16.94■□□□□ 0.3
APOBEC3B-202ENST00000335760 A0A0D9SFI3 127 aa16.94■□□□□ 0.3
APOBEC3B-202ENST00000335760 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
APOBEC3B-202ENST00000335760 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
APOBEC3B-202ENST00000335760 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 GPAA1O43292 621 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 CHMLP26374 656 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 NFIAQ12857 509 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
APOBEC3B-202ENST00000335760 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 TNNI2P48788 182 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 PICALMQ13492 652 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 STRBPQ96SI9 672 aaKnown RBP16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
APOBEC3B-202ENST00000335760 PRKAB2O43741 272 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 TOMM70O94826 608 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 USP5P45974 858 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 TCP10Q12799 353 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 RASA3Q14644 834 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 DEFB129Q9H1M3 183 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 DDX4Q9NQI0 724 aaKnown RBP16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 SLC4A4Q9Y6R1 1079 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
APOBEC3B-202ENST00000335760 CNTNAP1P78357 1384 aa16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 CDC45O75419 566 aa16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 FAM151AQ8WW52 585 aa16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
APOBEC3B-202ENST00000335760 ENTPD3O75355 529 aa16.89■□□□□ 0.3
APOBEC3B-202ENST00000335760 DLK2Q6UY11 383 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms