RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 GRM1Q13255 1194 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 CCDC93Q567U6 631 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.35
POLR1B-202ENST00000333990 MMP10P09238 476 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
POLR1B-202ENST00000333990 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
POLR1B-202ENST00000333990 KRT79Q5XKE5 535 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 KCNQ4P56696 695 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
POLR1B-202ENST00000333990 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 SSH2Q76I76 1423 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 SLC1A4P43007 532 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
POLR1B-202ENST00000333990 H7C1W4 665 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 STX1AQ16623 288 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 PRDM1O75626 825 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 GRAPQ13588 217 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
POLR1B-202ENST00000333990 GDPD2Q9HCC8 539 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 STAT6P42226 847 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 USP37Q86T82 979 aa12.82□□□□□ -0.36
POLR1B-202ENST00000333990 SPTLC2O15270 562 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 CDR1P51861 262 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 SYCP3Q8IZU3 236 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 SRP68Q9UHB9 627 aaKnown RBP12.81□□□□□ -0.36
POLR1B-202ENST00000333990 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 COL15A1P39059 1388 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 USP17L21D6R901 530 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 TCP10Q12799 353 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 CACNA2D4Q7Z3S7 1137 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 ATP8A2Q9NTI2 1148 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 CSADQ9Y600 493 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
POLR1B-202ENST00000333990 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 PANK2Q9BZ23 570 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 AS3MTQ9HBK9 375 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 SPATA31A1Q5TZJ5 1347 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 PHKA1P46020 1223 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 TFAP4Q01664 338 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 TXNRD1Q16881 649 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 PAF1Q8N7H5 531 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
POLR1B-202ENST00000333990 VWDEQ8N2E2 1590 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 HSPA4P34932 840 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 PPARAQ07869 468 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 SEPT11Q9NVA2 429 aaKnown RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 TTLL11Q8NHH1 800 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 OSBPL3Q9H4L5 887 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 MTIF2P46199 727 aaKnown RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
POLR1B-202ENST00000333990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■■■ 96.1
POLR1B-202ENST00000333990 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
POLR1B-202ENST00000333990 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 CHURC1Q8WUH1 139 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 ZBED4O75132 1171 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
POLR1B-202ENST00000333990 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 IFNL3Q8IZI9 196 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 RXRAP19793 462 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 SPAG1Q07617 926 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 TRIM28Q13263 835 aaKnown RBP12.79□□□□□ -0.36
POLR1B-202ENST00000333990 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
POLR1B-202ENST00000333990 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 CETN2P41208 172 aa12.79□□□□□ -0.36
POLR1B-202ENST00000333990 ZNF165P49910 485 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms