RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 IFIT3O14879 490 aaKnown RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 HOXA2O43364 376 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 PARP1P09874 1014 aaKnown RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 NEFHP12036 1026 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 IDEP14735 1019 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 SNAPC2Q13487 334 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 IRAK1BP1Q5VVH5 260 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 USHBP1Q8N6Y0 703 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 CCDC191Q8NCU4 936 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 SWAP70Q9UH65 585 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 SERTAD1Q9UHV2 236 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 ZHX1Q9UKY1 873 aaPredicted RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 VPS37CA5D8V6 355 aaPredicted RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 ASB14A6NK59 587 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 OATP04181 439 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 HUNKP57058 714 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 RPS8P62241 208 aaKnown RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 BLOC1S2Q6QNY1 142 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 GIMAP8Q8ND71 665 aaPredicted RBP4.34□□□□□ -1.72
KNTC1-201ENST00000333479 GLG1Q92896 1179 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 PPP1R9BQ96SB3 815 aa4.34□□□□□ -1.72
KNTC1-201ENST00000333479 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 STAG3L1P0CL83 205 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ARID4AP29374 1257 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 RAB3GAP1Q15042 981 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 TXNRD1Q16881 649 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ALDH1L2Q3SY69 923 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PLBD2Q8NHP8 589 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 TBC1D5Q92609 795 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 KATNAL1Q9BW62 490 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SLC12A5Q9H2X9 1139 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 GINM1Q9NU53 330 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SBNO1A3KN83 1393 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 GTF2A2P52657 109 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 HAUS3Q68CZ6 603 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 KSR2Q6VAB6 950 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 NSMFQ6X4W1 530 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 GPATCH11Q8N954 259 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 UBA5Q9GZZ9 404 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 STX8Q9UNK0 236 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ANGEL1Q9UNK9 670 aaKnown RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 A2ML1A8K2U0 1454 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PRMT3O60678 531 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PPFIA3O75145 1194 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ANXA13P27216 316 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SSTR3P32745 418 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ATXN3P54252 364 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 HMGN5P82970 282 aaKnown RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 APOBRQ0VD83 1088 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PUM3Q15397 648 aaKnown RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 HS2ST1Q7LGA3 356 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 KIF2CQ99661 725 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 STIM2Q9P246 746 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 TRPC6Q9Y210 931 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 FSD2A1L4K1 749 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ZNF233A6NK53 670 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 NDC80O14777 642 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 RGL2O15211 777 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SMARCA5O60264 1052 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 RPS6KA4O75676 772 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SETQ01105 290 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 UBE4AQ14139 1066 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 RC3H1Q5TC82 1133 aaKnown RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PLCD4Q9BRC7 762 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 RMND1Q9NWS8 449 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 MCM9Q9NXL9 1143 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 HOXC10Q9NYD6 342 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SLC4A4Q9Y6R1 1079 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ZFYVE9O95405 1425 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 USP17L8P0C7I0 530 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 TRPC3Q13507 836 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PPP2R5AQ15172 486 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 MUM1L1Q5H9M0 696 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 NCOA7Q8NI08 942 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 ZNF830Q96NB3 372 aaPredicted RBP4.33□□□□□ -1.72
KNTC1-201ENST00000333479 SLC12A6Q9UHW9 1150 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 PPP2R3BQ9Y5P8 575 aa4.33□□□□□ -1.72
KNTC1-201ENST00000333479 STK10O94804 968 aaKnown RBP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 FAM13AO94988 1023 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 MMP10P09238 476 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 SUPT20HL2P0C7V6 817 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 PPP1R2P41236 205 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 LMAN1P49257 510 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 SND1Q7KZF4 910 aaKnown RBP eCLIP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 RNF180Q86T96 592 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 RPUSD2Q8IZ73 545 aaKnown RBP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 EFHBQ8N7U6 833 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 TTC16Q8NEE8 873 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 RAB3IL1Q8TBN0 382 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 RBM46Q8TBY0 533 aaKnown RBP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 PZPP20742 1482 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 PPP2R5BQ15173 497 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 PREPLQ4J6C6 727 aaPredicted RBP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 WDR44Q5JSH3 913 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 FAM160B2Q86V87 743 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 CCDC89Q8N998 374 aa4.32□□□□□ -1.72
KNTC1-201ENST00000333479 UPF1Q92900 1129 aaKnown RBP eCLIP4.32□□□□□ -1.72
KNTC1-201ENST00000333479 IRF2BPLQ9H1B7 796 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms