RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ATP1A3P13637 1013 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 TTF1Q15361 905 aaPredicted RBP15.89■□□□□ 0.14
EPHB3-201ENST00000330394 SLC5A1P13866 664 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 ASIC1P78348 528 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 EEF2KMTQ96G04 330 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 TTC21AQ8NDW8 1320 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 SMIM23A6NLE4 172 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 INPP5BP32019 993 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 VAV2P52735 878 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 PPM1EQ8WY54 764 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 TSG101Q99816 390 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 EXOC1Q9NV70 894 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 SYNMO15061 1565 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 TLDC2A0PJX2 215 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
EPHB3-201ENST00000330394 CYP21A2P08686 494 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 LIG3P49916 1009 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
EPHB3-201ENST00000330394 PRDM15P57071 1507 aaPredicted RBP15.88■□□□□ 0.13
EPHB3-201ENST00000330394 POSTNQ15063 836 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.13
EPHB3-201ENST00000330394 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 TAF5LO75529 589 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 DDIT3P35638 169 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 MLKLQ8NB16 471 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 ANGEL1Q9UNK9 670 aaKnown RBP15.88■□□□□ 0.13
EPHB3-201ENST00000330394 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 COBLO75128 1261 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 TUBBP07437 444 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 LONRF2Q1L5Z9 754 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
EPHB3-201ENST00000330394 SSR1P43307 286 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 EIF4A1P60842 406 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 IFIT1BQ5T764 474 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 CCDC121Q6ZUS5 278 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 HELLSQ9NRZ9 838 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 IQUBQ8NA54 791 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 PGBD1Q96JS3 809 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 GSTTP1A0A1W2PQM5 241 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 GPAA1O43292 621 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 TBC1D8BQ0IIM8 1120 aa15.87■□□□□ 0.13
EPHB3-201ENST00000330394 CMTR1Q8N1G2 835 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 TTF2Q9UNY4 1162 aaKnown RBP15.87■□□□□ 0.13
EPHB3-201ENST00000330394 ATP7AQ04656 1500 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 GOLGA6BA6NDN3 693 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 SPAG5Q96R06 1193 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 KRT23Q9C075 422 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 SYNRGQ9UMZ2 1314 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 CYP7A1P22680 504 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 RRP15Q9Y3B9 282 aaKnown RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 CUTAO60888 179 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 ZMYND10O75800 440 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 TUBB4BP68371 445 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 CPLX4Q7Z7G2 160 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 VPS36Q86VN1 386 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 TMOD3Q9NYL9 352 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 PFKFB2O60825 505 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 BRD3Q15059 726 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 TTC19Q6DKK2 380 aaPredicted RBP15.86■□□□□ 0.13
EPHB3-201ENST00000330394 RGS22Q8NE09 1264 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 PI4K2BQ8TCG2 481 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 ESR2Q92731 530 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 PARD6BQ9BYG5 372 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 GJB4Q9NTQ9 266 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 FAN1Q9Y2M0 1017 aa15.86■□□□□ 0.13
EPHB3-201ENST00000330394 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
EPHB3-201ENST00000330394 GCKRQ14397 625 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 E2F4Q16254 413 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 RILPL1Q5EBL4 403 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 CCDC91Q7Z6B0 441 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 CALML4Q96GE6 196 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 BLZF1Q9H2G9 400 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 RCOR1Q9UKL0 485 aa15.85■□□□□ 0.13
EPHB3-201ENST00000330394 ATP5JP18859 108 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 CAVIN4Q5BKX8 364 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 ZNF444Q8N0Y2 327 aaPredicted RBP15.84■□□□□ 0.13
EPHB3-201ENST00000330394 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 NSUN7Q8NE18 718 aaKnown RBP15.84■□□□□ 0.13
EPHB3-201ENST00000330394 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
EPHB3-201ENST00000330394 PDIA3P30101 505 aaKnown RBP15.84■□□□□ 0.13
EPHB3-201ENST00000330394 NECTIN1Q15223 517 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 CYP26C1Q6V0L0 522 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 CTNNBL1Q8WYA6 563 aaPredicted RBP15.84■□□□□ 0.13
EPHB3-201ENST00000330394 PRDM1O75626 825 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
EPHB3-201ENST00000330394 GOLGA5Q8TBA6 731 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms