RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 CMA1P23946 247 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 GPTP24298 496 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
BRCC3-201ENST00000330045 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 RGS22Q8NE09 1264 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
BRCC3-201ENST00000330045 TEX13AQ9BXU3 409 aaPredicted RBP17.81■□□□□ 0.44
BRCC3-201ENST00000330045 OSBPL5Q9H0X9 879 aaPredicted RBP17.81■□□□□ 0.44
BRCC3-201ENST00000330045 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
BRCC3-201ENST00000330045 HSPA1LP34931 641 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 NLRP12P59046 1061 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
BRCC3-201ENST00000330045 PFKFB1P16118 471 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 ITGA6P23229 1130 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 DENND2AQ9ULE3 1009 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 BIN1O00499 593 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 SLC39A14Q15043 492 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 CCAR2Q8N163 923 aaKnown RBP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 TTLL11Q8NHH1 800 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 ALG1Q9BT22 464 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 GREM2Q9H772 168 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 KCND1Q9NSA2 647 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 TRMT1Q9NXH9 659 aaKnown RBP17.8■□□□□ 0.44
BRCC3-201ENST00000330045 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
BRCC3-201ENST00000330045 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.441e-9■■■□□ 15.6
BRCC3-201ENST00000330045 TPM4P67936 248 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 ITPK1Q13572 414 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 CYB5R4Q7L1T6 521 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
BRCC3-201ENST00000330045 CNNM1Q9NRU3 951 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 ATRNO75882 1429 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 MAP3K15Q6ZN16 1313 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
BRCC3-201ENST00000330045 CDKL5O76039 1030 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 SMC2O95347 1197 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 APPP05067 770 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
BRCC3-201ENST00000330045 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
BRCC3-201ENST00000330045 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 IFNKQ9P0W0 207 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 USP21Q9UK80 565 aa17.79■□□□□ 0.44
BRCC3-201ENST00000330045 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 VPS72Q15906 364 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 NAA30Q147X3 362 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 CPLX2Q6PUV4 134 aaKnown RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 NLRP10Q86W26 655 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
BRCC3-201ENST00000330045 FNBP4Q8N3X1 1017 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 PIH1D3Q9NQM4 214 aaKnown RBP17.78■□□□□ 0.44
BRCC3-201ENST00000330045 CTSWP56202 376 aa17.77■□□□□ 0.44
BRCC3-201ENST00000330045 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
BRCC3-201ENST00000330045 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.44
BRCC3-201ENST00000330045 TIGD1Q96MW7 591 aa17.77■□□□□ 0.44
BRCC3-201ENST00000330045 MROH7-TTC4A0A0A0MT08 1334 aa17.77■□□□□ 0.44
BRCC3-201ENST00000330045 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 RXRAP19793 462 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 SYKP43405 635 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 SIK1P57059 783 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 NCAPHQ15003 741 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 KRT40Q6A162 431 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 TMC6Q7Z403 805 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 FEZ1Q99689 392 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 MYH3P11055 1940 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 ZNF532Q9HCE3 1301 aa17.77■□□□□ 0.43
BRCC3-201ENST00000330045 PPP6R2O75170 966 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 CDC27P30260 824 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 GNL2Q13823 731 aaKnown RBP17.76■□□□□ 0.43
BRCC3-201ENST00000330045 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
BRCC3-201ENST00000330045 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 CGNQ9P2M7 1197 aaKnown RBP17.76■□□□□ 0.43
BRCC3-201ENST00000330045 B4E1Z4 1266 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 PDE8BO95263 885 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
BRCC3-201ENST00000330045 JMYQ8N9B5 988 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 PHKBQ93100 1093 aa17.76■□□□□ 0.43
BRCC3-201ENST00000330045 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
BRCC3-201ENST00000330045 KIF2AO00139 706 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-201ENST00000330045 IKBKBO14920 756 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 MICU3Q86XE3 530 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms