RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 RIOK1Q9BRS2 568 aaKnown RBP18.64■□□□□ 0.57
PGBD2-201ENST00000329291 GNAT2P19087 354 aa18.63■□□□□ 0.57
PGBD2-201ENST00000329291 GRAPQ13588 217 aa18.63■□□□□ 0.57
PGBD2-201ENST00000329291 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
PGBD2-201ENST00000329291 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
PGBD2-201ENST00000329291 JAG2Q9Y219 1238 aa18.63■□□□□ 0.57
PGBD2-201ENST00000329291 MAGEB6P1A0A0J9YX57 407 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 TDO2P48775 406 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 KDM4AO75164 1064 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 RXRAP19793 462 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
PGBD2-201ENST00000329291 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
PGBD2-201ENST00000329291 NAA16Q6N069 864 aaPredicted RBP18.62■□□□□ 0.57
PGBD2-201ENST00000329291 RPGRQ92834 1020 aaKnown RBP18.62■□□□□ 0.57
PGBD2-201ENST00000329291 NASPP49321 788 aaPredicted RBP18.61■□□□□ 0.57
PGBD2-201ENST00000329291 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
PGBD2-201ENST00000329291 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
PGBD2-201ENST00000329291 GPR101Q96P66 508 aaPredicted RBP18.61■□□□□ 0.57
PGBD2-201ENST00000329291 LY9Q9HBG7 655 aa18.61■□□□□ 0.57
PGBD2-201ENST00000329291 CACNA1SQ13698 1873 aa18.61■□□□□ 0.57
PGBD2-201ENST00000329291 MECOMQ03112 1051 aa18.61■□□□□ 0.57
PGBD2-201ENST00000329291 NSUN4Q96CB9 384 aaKnown RBP18.61■□□□□ 0.57
PGBD2-201ENST00000329291 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
PGBD2-201ENST00000329291 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
PGBD2-201ENST00000329291 SEMA3EO15041 775 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 DDR1Q08345 913 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 CSPP1Q1MSJ5 1256 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
PGBD2-201ENST00000329291 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 ANKIB1Q9P2G1 1089 aa18.6■□□□□ 0.57
PGBD2-201ENST00000329291 PRDX5P30044 214 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 CDC27P30260 824 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 FLAD1Q8NFF5 587 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
PGBD2-201ENST00000329291 MYL10Q9BUA6 226 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
PGBD2-201ENST00000329291 ELP1O95163 1332 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
PGBD2-201ENST00000329291 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 RRP12Q5JTH9 1297 aaKnown RBP18.59■□□□□ 0.57
PGBD2-201ENST00000329291 CCDC183Q5T5S1 534 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 SPATA32Q96LK8 384 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 ZKSCAN3Q9BRR0 538 aa18.59■□□□□ 0.57
PGBD2-201ENST00000329291 FTOQ9C0B1 505 aaKnown RBP eCLIP18.59■□□□□ 0.57
PGBD2-201ENST00000329291 MINDY4BA8MYZ0 360 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 LIG1P18858 919 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 PPARAQ07869 468 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 CRY2Q49AN0 593 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.57
PGBD2-201ENST00000329291 PGBD1Q96JS3 809 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 TMEM87BQ96K49 555 aa18.58■□□□□ 0.57
PGBD2-201ENST00000329291 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.57
PGBD2-201ENST00000329291 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.57
PGBD2-201ENST00000329291 FAM217BQ9NTX9 383 aaPredicted RBP18.58■□□□□ 0.57
PGBD2-201ENST00000329291 ORC3Q9UBD5 711 aaPredicted RBP18.58■□□□□ 0.57
PGBD2-201ENST00000329291 CEBPZQ03701 1054 aaKnown RBP18.58■□□□□ 0.56
PGBD2-201ENST00000329291 EVX2Q03828 476 aa18.58■□□□□ 0.56
PGBD2-201ENST00000329291 NLGN1Q8N2Q7 840 aa18.58■□□□□ 0.56
PGBD2-201ENST00000329291 IFIT3O14879 490 aaKnown RBP18.57■□□□□ 0.56
PGBD2-201ENST00000329291 DHX16O60231 1041 aaKnown RBP18.57■□□□□ 0.56
PGBD2-201ENST00000329291 GPSM2P81274 684 aa18.57■□□□□ 0.56
PGBD2-201ENST00000329291 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
PGBD2-201ENST00000329291 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
PGBD2-201ENST00000329291 CPLX1O14810 134 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 METAP2P50579 478 aaKnown RBP eCLIP18.56■□□□□ 0.56
PGBD2-201ENST00000329291 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 MICU3Q86XE3 530 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 COL23A1Q86Y22 540 aaPredicted RBP18.56■□□□□ 0.56
PGBD2-201ENST00000329291 RNF214Q8ND24 703 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 CHMP4CQ96CF2 233 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 AIFM3Q96NN9 605 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 KRT23Q9C075 422 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 LEMD3Q9Y2U8 911 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 KIF3AQ9Y496 699 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 GRIK5Q16478 980 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
PGBD2-201ENST00000329291 LIFRP42702 1097 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 NTRK3Q16288 839 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 AATFQ9NY61 560 aaKnown RBP eCLIP18.55■□□□□ 0.56
PGBD2-201ENST00000329291 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
PGBD2-201ENST00000329291 ANAPC4Q9UJX5 808 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 XDHP47989 1333 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 TIAM2Q8IVF5 1701 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 UBE2Q2LH0YL09 131 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 ZBTB43O43298 467 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 FBXO18Q8NFZ0 1043 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 PHKBQ93100 1093 aa18.55■□□□□ 0.56
PGBD2-201ENST00000329291 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
PGBD2-201ENST00000329291 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
PGBD2-201ENST00000329291 C8orf76Q96K31 380 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms