RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LRRC27Q9C0I9 530 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 ATP2A1O14983 1001 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 NUCB1Q02818 461 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 KRT23Q9C075 422 aa8.85□□□□□ -0.99
CIITA-201ENST00000324288 SPTLC2O15270 562 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 JAKMIP2Q96AA8 810 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 FAM169AQ9Y6X4 670 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 CAMSAP2Q08AD1 1489 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 BACH1O14867 736 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 BMP2KLQ5H9B9 411 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 HMG20BQ9P0W2 317 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 PA2G4Q9UQ80 394 aaKnown RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 FRMD4BQ9Y2L6 1034 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 A0A1B0GVL5 298 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 GSTO1P78417 241 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 APOBRQ0VD83 1088 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 RUFY3Q7L099 469 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 CCDC110Q8TBZ0 833 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 CCDC152Q4G0S7 254 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 SH2D4BQ5SQS7 431 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 XAGE3Q8WTP9 111 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 ZKSCAN3Q9BRR0 538 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 MTX1Q13505 466 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 FNBP4Q8N3X1 1017 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 TRIM6Q9C030 488 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 ESR2Q92731 530 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 ZSCAN16Q9H4T2 348 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 PIK3R4Q99570 1358 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 EXOC5O00471 708 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 SPAG1Q07617 926 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 FYB2Q5VWT5 728 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 GABPB1Q06547 395 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 SDCCAG8Q86SQ7 713 aaPredicted RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 PYM1Q9BRP8 204 aaKnown RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 TNNQ9UQP3 1299 aa8.84□□□□□ -0.99
CIITA-201ENST00000324288 EPRSP07814 1512 aaKnown RBP8.84□□□□□ -0.99
CIITA-201ENST00000324288 KRT86O43790 486 aa8.84□□□□□ -1
CIITA-201ENST00000324288 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -1
CIITA-201ENST00000324288 C6orf50Q9HD87 102 aa8.84□□□□□ -1
CIITA-201ENST00000324288 GINS2Q9Y248 185 aa8.84□□□□□ -1
CIITA-201ENST00000324288 CLTAP09496 248 aa8.83□□□□□ -1
CIITA-201ENST00000324288 KRT2P35908 639 aa8.83□□□□□ -1
CIITA-201ENST00000324288 BIRC3Q13489 604 aa8.83□□□□□ -1
CIITA-201ENST00000324288 MUM1Q2TAK8 710 aa8.83□□□□□ -1
CIITA-201ENST00000324288 C8orf34Q49A92 452 aa8.83□□□□□ -1
CIITA-201ENST00000324288 SEL1L2Q5TEA6 688 aa8.83□□□□□ -1
CIITA-201ENST00000324288 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
CIITA-201ENST00000324288 PRPHP41219 470 aa8.83□□□□□ -1
CIITA-201ENST00000324288 UHMK1Q8TAS1 419 aaKnown RBP8.83□□□□□ -1
CIITA-201ENST00000324288 CXorf38Q8TB03 319 aa8.83□□□□□ -1
CIITA-201ENST00000324288 ZNF174Q15697 407 aa8.83□□□□□ -1
CIITA-201ENST00000324288 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
CIITA-201ENST00000324288 TNFAIP3P21580 790 aa8.83□□□□□ -1
CIITA-201ENST00000324288 MAP7Q14244 749 aa8.83□□□□□ -1
CIITA-201ENST00000324288 MIER3Q7Z3K6 550 aa8.83□□□□□ -1
CIITA-201ENST00000324288 SPDYE3A6NKU9 549 aa8.83□□□□□ -1
CIITA-201ENST00000324288 SPOPO43791 374 aa8.83□□□□□ -1
CIITA-201ENST00000324288 LDHCP07864 332 aa8.83□□□□□ -1
CIITA-201ENST00000324288 ATP6V1AP38606 617 aa8.83□□□□□ -1
CIITA-201ENST00000324288 COG7P83436 770 aa8.83□□□□□ -1
CIITA-201ENST00000324288 ADAT2Q7Z6V5 191 aaKnown RBP8.83□□□□□ -1
CIITA-201ENST00000324288 AGTPBP1Q9UPW5 1226 aa8.83□□□□□ -1
CIITA-201ENST00000324288 PTPRCP08575 1304 aa8.83□□□□□ -1
CIITA-201ENST00000324288 RNF168Q8IYW5 571 aaPredicted RBP8.83□□□□□ -1
CIITA-201ENST00000324288 SLC9C2Q5TAH2 1124 aa8.83□□□□□ -1
CIITA-201ENST00000324288 C8orf74Q6P047 294 aa8.83□□□□□ -1
CIITA-201ENST00000324288 TACC3Q9Y6A5 838 aa8.83□□□□□ -1
CIITA-201ENST00000324288 PFDN1O60925 122 aa8.83□□□□□ -1
CIITA-201ENST00000324288 NBPF7P0C2Y1 421 aaPredicted RBP8.83□□□□□ -1
CIITA-201ENST00000324288 FANCCQ00597 558 aa8.83□□□□□ -1
CIITA-201ENST00000324288 MAEAQ7L5Y9 396 aa8.83□□□□□ -1
CIITA-201ENST00000324288 ZRANB1Q9UGI0 708 aa8.83□□□□□ -1
CIITA-201ENST00000324288 ZBTB12Q9Y330 459 aaPredicted RBP8.83□□□□□ -1
CIITA-201ENST00000324288 ARAP1Q96P48 1450 aa8.83□□□□□ -1
CIITA-201ENST00000324288 GADD45BO75293 160 aaPredicted RBP8.83□□□□□ -1
CIITA-201ENST00000324288 CCDC26Q8TAB7 109 aa8.83□□□□□ -1
CIITA-201ENST00000324288 SNCBQ16143 134 aa8.82□□□□□ -1
CIITA-201ENST00000324288 RNF10Q8N5U6 811 aaKnown RBP8.82□□□□□ -1
CIITA-201ENST00000324288 RNF34Q969K3 372 aa8.82□□□□□ -1
CIITA-201ENST00000324288 FAF1Q9UNN5 650 aaPredicted RBP8.82□□□□□ -1
CIITA-201ENST00000324288 USTQ9Y2C2 406 aa8.82□□□□□ -1
CIITA-201ENST00000324288 VPS16Q9H269 839 aa8.82□□□□□ -1
CIITA-201ENST00000324288 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
CIITA-201ENST00000324288 TBC1D7Q9P0N9 293 aa8.82□□□□□ -1
CIITA-201ENST00000324288 RRP36Q96EU6 259 aaKnown RBP8.82□□□□□ -1
CIITA-201ENST00000324288 TSGA10Q9BZW7 698 aa8.82□□□□□ -1
CIITA-201ENST00000324288 DAPK1P53355 1430 aa8.82□□□□□ -1
CIITA-201ENST00000324288 DIDO1Q9BTC0 2240 aaKnown RBP8.82□□□□□ -1
CIITA-201ENST00000324288 VWA3AA6NCI4 1184 aa8.82□□□□□ -1
CIITA-201ENST00000324288 KIF22Q14807 665 aa8.82□□□□□ -1
CIITA-201ENST00000324288 OTUD7BQ6GQQ9 843 aa8.82□□□□□ -1
CIITA-201ENST00000324288 PHLDB2Q86SQ0 1253 aa8.82□□□□□ -1
CIITA-201ENST00000324288 ANKRD24Q8TF21 1146 aa8.82□□□□□ -1
CIITA-201ENST00000324288 DESI2Q9BSY9 194 aa8.82□□□□□ -1
CIITA-201ENST00000324288 GPCPD1Q9NPB8 672 aa8.82□□□□□ -1
CIITA-201ENST00000324288 MCM9Q9NXL9 1143 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms